LOC_Os02g46580 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os02g46580 T10970_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os02g46580.1 CCHC ZF 295 312

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

659 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BRADI3G06027 Brachypodium distachyon BRADI3G06027 N 0.000
BRADI5G01317 Brachypodium distachyon BRADI5G01317 N 0.000
LjSGA_073042.1 Lotus japonicus LjSGA_073042.1 N 0.000
chr6.CM0885.320.nc Lotus japonicus chr6.CM0885.320.nc N 0.000
chr6.CM0885.260.nc Lotus japonicus chr6.CM0885.260.nc N 0.000
cassava14932.m1 Manihot esculenta cassava14932.m1 N 0.000
cassava13324.valid.m1 Manihot esculenta cassava13324.valid.m1 N 0.000
cassava13323.valid.m1 Manihot esculenta cassava13323.valid.m1 N 0.000
cassava13322.valid.m1 Manihot esculenta cassava13322.valid.m1 N 0.000
Medtr2g005610 Medicago truncatula Medtr2g005610 N 0.000
BGIOSIBCE017245 Oryza indica BGIOSIBCE017245 N 0.000
BGIOSIBCE013986 Oryza indica BGIOSIBCE013986 N 0.000
LOC_Os05g01520 Oryza sativa LOC_Os05g01520 N 0.000
LOC_Os04g04000 Oryza sativa LOC_Os04g04000 N 0.000
B9N0D5_POPTR Populus trichocarpa POPTR_0004s23250 N 0.000
29765.m000746 Ricinus communis 29765.m000746 N 0.000
SB09G000580 Sorghum bicolor Sb09g000580 N 0.000
GRMZM2G303312 Zea mays GRMZM2G303312 N 0.000