CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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KRR1
(
Felis catus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSFCAG00000005207
T18770_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFCAP00000004825
KH
154
203
FVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVRKVV
Links
Other
KH
family RBPs
Other
Felis catus
RBPs
149 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
XM_002876131.1
Arabidopsis lyrata
fgenesh2_kg.5__1664__AT3G52980.1
N
0.000
AT2G05160
Arabidopsis thaliana
AT2G05160-TAIR-G
N
0.000
PK01281.1
Cannabis sativa
PK01281.1
N
0.000
PK20504.1
Cannabis sativa
PK20504.1
N
0.000
MDP0000214614
Malus x domestica
MDP0000214614
N
0.000
MDP0000906147
Malus x domestica
MDP0000906147
N
0.000
cassava7063.valid.m1
Manihot esculenta
cassava7063.valid.m1
N
0.000
cassava36931.valid.m1
Manihot esculenta
cassava36931.valid.m1
N
0.000
cassava31400.valid.m1
Manihot esculenta
cassava31400.valid.m1
N
0.000
cassava31399.valid.m1
Manihot esculenta
cassava31399.valid.m1
N
0.000
Medtr5g102170
Medicago truncatula
Medtr5g102170
N
0.000
Medtr4g118330
Medicago truncatula
Medtr4g118330
N
0.000
mgf003557m
Mimulus guttatus
mgf003557m
N
0.000
B9IAR9_POPTR
Populus trichocarpa
POPTR_0014s16340
N
0.000
B9HNZ4_POPTR
Populus trichocarpa
POPTR_0009s05520
N
0.000
B9GWA9_POPTR
Populus trichocarpa
POPTR_0003s20310
N
0.000
B9GTF9_POPTR
Populus trichocarpa
POPTR_0002s22240
N
0.000
POPTR_0001s05760
Populus trichocarpa
POPTR_0001s05760
N
0.000
ppa003564m
Prunus persica
ppa003564m
N
0.000
ppa019338m
Prunus persica
ppa019338m
N
0.000
27613.m000645
Ricinus communis
27613.m000645
N
0.000
estExt_fgenesh2_pg.C_00420
Selaginella moellendorfii
estExt_fgenesh2_pg.C_00420
N
0.000
estExt_fgenesh2_pg.C_80472
Selaginella moellendorfii
estExt_fgenesh2_pg.C_80472
N
0.000
GSVIVG00037782001
Vitis vinifera
GSVIVG00037782001
N
0.000
GSVIVG00001467001
Vitis vinifera
GSVIVG00001467001
N
0.000