CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GD11672
(
Drosophila simulans
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
FBgn0183412
T19965_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0210074
KH
13
94
AVKVAVPVRDHPKLLGPKGNSMKRLQEDTMCKMAVLGRGSMRDRRKEEELRGSGDSRYAHLFEDLHVEISTFAAPAEAHARI
Links
Other
KH
family RBPs
Other
Drosophila simulans
RBPs
14 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
estExt_fgenesh2_kg.C_60291
Agaricus bisporus
estExt_fgenesh2_kg.C_60291
N
0.000
Ame_R017990
Ailuropoda melanoleuca
Ame_R017990
N
0.000
AMAG_05802
Allomyces macrogynus
AMAG_05802
N
0.000
AMAG_12234
Allomyces macrogynus
AMAG_12234
N
0.000
RBBP6
Bos taurus
ENSBTAG00000009441
N
0.000
LOC100395616
Callithrix jacchus
ENSCJAG00000020661
N
0.000
RBBP6
Canis familiaris
ENSCAFG00000017566
N
0.000
RBBP6
Choloepus hoffmanni
ENSCHOG00000000278
N
0.000
CC1G_00892
Coprinopsis cinerea
CC1G_00892
N
0.000
CNBG_0786
Cryptococcus neoformans
CNBG_0786
N
0.000
rbbp6l
Danio rerio
ENSDARG00000037919
N
0.000
RBBP6
Dasypus novemcinctus
ENSDNOG00000015497
N
0.000
ENSDORG00000010285
Dipodomys ordii
ENSDORG00000010285
N
0.000
ECU09_0340
Encephalitozoon cuniculi
ECU09_0340
N
0.000
EBI_27443
Enterocytozoon bieneusi
EBI_27443
N
0.000
Q866R2_HORSE
Equus caballus
ENSECAG00000014572
N
0.000
RBBP6
Erinaceus europaeus
ENSEEUG00000001683
N
0.000
RBBP6
Gallus gallus
ENSGALG00000006043
N
0.000
RBBP6
Gorilla gorilla
ENSGGOG00000007137
N
0.000
estExt_fgenesh2_pm.C_60269
Heterobasidion annosum
estExt_fgenesh2_pm.C_60269
N
0.000
RBBP6
Homo sapiens
ENSG00000122257
N
0.000
XP_002162513.1
Hydra magnipapillata
XP_002162513.1
N
0.000
eu2.Lbscf0002g03430
Laccaria bicolor
eu2.Lbscf0002g03430
N
0.000
RBBP6
Loxodonta africana
ENSLAFG00000009528
N
0.000
RBBP6
Macaca mulatta
ENSMMUG00000015908
N
0.000
RBBP6
Macropus eugenii
ENSMEUG00000014491
N
0.000
RBBP6
Meleagris gallopavo
ENSMGAG00000006423
N
0.000
RBBP6
Microcebus murinus
ENSMICG00000008059
N
0.000
estExt_fgenesh1_pg.C_90130
Micromonas pusilla
estExt_fgenesh1_pg.C_90130
N
0.000
ENSMODG00000016318
Monodelphis domestica
ENSMODG00000016318
N
0.000
ENSMODG00000024432
Monodelphis domestica
ENSMODG00000024432
N
0.000
ENSMODG00000024434
Monodelphis domestica
ENSMODG00000024434
N
0.000
ENSMODG00000024435
Monodelphis domestica
ENSMODG00000024435
N
0.000
estExt_fgeneshMC_pg.C_60156
Mucor circinelloides
estExt_fgeneshMC_pg.C_60156
N
0.000
Rbbp6
Mus musculus
ENSMUSG00000030779
N
0.000
RBBP6
Myotis lucifugus
ENSMLUG00000010601
N
0.000
RBBP6
Ochotona princeps
ENSOPRG00000016272
N
0.000
RBBP6
Ornithorhynchus anatinus
ENSOANG00000007673
N
0.000
RBBP6
Oryctolagus cuniculus
ENSOCUG00000004346
N
0.000
RBBP6
Pan troglodytes
ENSPTRG00000007897
N
0.000
e_gwh2.3.362.1
Phanerochaete chrysosporium
e_gwh2.3.362.1
N
0.000
fgeneshPB_pg.4__237
Phycomyces blakesleeanus
fgeneshPB_pg.4__237
N
0.000
e_gw1.147.34.1
Physcomitrella patens
e_gw1.147.34.1
N
0.000
e_gw1.84.86.1
Physcomitrella patens
e_gw1.84.86.1
N
0.000
PITG_10087
Phytophthora infestans
PITG_10087
N
0.000
fgenesh1_pg.C_scaffold_47000011
Phytophthora ramorum
fgenesh1_pg.C_scaffold_47000011
N
0.000
s_441997
Phytophthora sojae
s_441997
N
0.000
estExt_Genewise1.C_60832
Pleurotus ostreatus
estExt_Genewise1.C_60832
N
0.000
ENSPPYG00000007201
Pongo pygmaeus
ENSPPYG00000007201
N
0.000
e_gw1.135.14.1
Postia placenta
e_gw1.135.14.1
N
0.000
e_gw1.311.2.1
Postia placenta
e_gw1.311.2.1
N
0.000
RBBP6
Pteropus vampyrus
ENSPVAG00000001110
N
0.000
Rbbp6
Rattus norvegicus
ENSRNOG00000012806
N
0.000
RO3G_12479
Rhizopus oryzae
RO3G_12479
N
0.000
gw1.4.1338.1
Schizophyllum commune
gw1.4.1338.1
N
0.000
SJAG_02668
Schizosaccharomyces japonicus
SJAG_02668
N
0.000
SPBP8B7.15c
Schizosaccharomyces pombe
SPBP8B7.15c
N
0.000
e_gw1.0.2594.1
Selaginella moellendorfii
e_gw1.0.2594.1
N
0.000
Genemark.8861_g
Serpula lacrymans
Genemark.8861_g
N
0.000
RBBP6
Sorex araneus
ENSSARG00000004977
N
0.000
RBBP6
Spermophilus tridecemlineatus
ENSSTOG00000016006
N
0.000
estExt_fgenesh1_pg.C_130086
Sporobolomyces roseus
estExt_fgenesh1_pg.C_130086
N
0.000
RBBP6
Sus scrofa
ENSSSCG00000007830
N
0.000
RBBP6
Taeniopygia guttata
ENSTGUG00000006185
N
0.000
RBBP6
Tarsius syrichta
ENSTSYG00000000822
N
0.000
fgeneshTM_pm.1_#_792
Tremella mesenterica
fgeneshTM_pm.1_#_792
N
0.000
RBBP6
Tursiops truncatus
ENSTTRG00000002696
N
0.000
UM00321
Ustilago maydis
UM00321
N
0.000
RBBP6
Vicugna pacos
ENSVPAG00000006458
N
0.000