CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Y53C12B.2
(
Caenorhabditis elegans
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
Y53C12B.2
T20317_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Y53C12B.2
KH
201
250
VSRAIGRIAGKDGRTKLVIENTTKTRIVVANTKIHILGAYQNLKLARNAV
Links
Other
KH
family RBPs
Other
Caenorhabditis elegans
RBPs
41 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R017773
Ailuropoda melanoleuca
Ame_R017773
I
0.000
RBM46
Anolis carolinensis
ENSACAG00000015599
I
0.000
RBM46
Bos taurus
ENSBTAG00000001696
I
0.000
LOC100409217
Callithrix jacchus
ENSCJAG00000001768
I
0.000
RBM46
Canis familiaris
ENSCAFG00000008473
I
0.000
ENSCPOG00000010284
Cavia porcellus
ENSCPOG00000010284
I
0.000
ENSCPOG00000020396
Cavia porcellus
ENSCPOG00000020396
I
0.000
RBM46
Choloepus hoffmanni
ENSCHOG00000003429
I
0.000
rbm46
Danio rerio
ENSDARG00000079452
I
0.000
RBM46
Dasypus novemcinctus
ENSDNOG00000016195
I
0.000
RBM46
Echinops telfairi
ENSETEG00000014902
I
0.000
RBM46
Equus caballus
ENSECAG00000007649
I
0.000
RBM46
Felis catus
ENSFCAG00000009246
I
0.000
RBM46
Gorilla gorilla
ENSGGOG00000001876
I
0.000
RBM46
Homo sapiens
ENSG00000151962
D
0.000
RBM46
Loxodonta africana
ENSLAFG00000015448
I
0.000
RBM46
Macaca mulatta
ENSMMUG00000021147
I
0.000
RBM46
Macropus eugenii
ENSMEUG00000013328
I
0.000
RBM46
Monodelphis domestica
ENSMODG00000001302
I
0.000
Rbm46
Mus musculus
ENSMUSG00000033882
I
0.000
RBM46
Myotis lucifugus
ENSMLUG00000003221
I
0.000
RBM46
Ornithorhynchus anatinus
ENSOANG00000002141
I
0.000
RBM46
Oryctolagus cuniculus
ENSOCUG00000017859
I
0.000
RBM46
Pan troglodytes
ENSPTRG00000016538
I
0.000
ENSPPYG00000015144
Pongo pygmaeus
ENSPPYG00000015144
I
0.000
RBM46
Pteropus vampyrus
ENSPVAG00000008376
I
0.000
Rbm46
Rattus norvegicus
ENSRNOG00000025823
I
0.000
RBM46
Sorex araneus
ENSSARG00000006520
I
0.000
RBM46
Sus scrofa
ENSSSCG00000008994
I
0.000
RBM46
Takifugu rubripes
ENSTRUG00000004237
I
0.000
RBM46
Tarsius syrichta
ENSTSYG00000010435
I
0.000
RBM46
Tetraodon nigroviridis
ENSTNIG00000008714
I
0.000
RBM46
Tupaia belangeri
ENSTBEG00000013949
I
0.000
RBM46
Tursiops truncatus
ENSTTRG00000001239
I
0.000
RBM46_XENTR
Xenopus tropicalis
ENSXETG00000022412
I
0.000