estExt_Genewise1Plus.C_10658 (Mucor circinelloides)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 estExt_Genewise1Plus.C_10658 T20953_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_10658 KH 92 141

Links

Other KH family RBPs
Other Mucor circinelloides RBPs

227 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RO3G_05288 Rhizopus oryzae RO3G_05288 N 0.980
RO3G_00885 Rhizopus oryzae RO3G_00885 N 0.980
estExt_Genewise1Plus.C_250095 Phycomyces blakesleeanus estExt_Genewise1Plus.C_250095 N 0.940
e_gww2.1.865.1 Phanerochaete chrysosporium e_gww2.1.865.1 N 0.920
fgenesh3_pm.54__15 Postia placenta fgenesh3_pm.54__15 N 0.920
e_gw1.12.287.1 Serpula lacrymans e_gw1.12.287.1 N 0.900
gw1.1.2472.1 Pleurotus ostreatus gw1.1.2472.1 N 0.900
e_gw1.2.756.1 Heterobasidion annosum e_gw1.2.756.1 N 0.880
XP_001202155.1 Strongylocentrotus purpuratus XP_001202155.1 N 0.860
e_gw1.2.2126.1 Schizophyllum commune e_gw1.2.2126.1 N 0.860
e_gw1.15.315.1 Tremella mesenterica e_gw1.15.315.1 N 0.860
estExt_fgenesh2_kg.C_20130 Agaricus bisporus estExt_fgenesh2_kg.C_20130 N 0.860
XP_001202160.1 Strongylocentrotus purpuratus XP_001202160.1 N 0.860
e_gwh1.2.512.1 Laccaria bicolor e_gwh1.2.512.1 N 0.860
XP_798188.2 Strongylocentrotus purpuratus XP_798188.2 N 0.860
XP_791733.2 Strongylocentrotus purpuratus XP_791733.2 N 0.860
CNBG_1323 Cryptococcus neoformans CNBG_1323 N 0.840
PTTG_01898 Puccinia triticina PTTG_01898 N 0.840
AMAG_14219 Allomyces macrogynus AMAG_14219 N 0.840
AMAG_12889 Allomyces macrogynus AMAG_12889 N 0.840
pno1 Danio rerio ENSDARG00000008502 N 0.840
Q6VBQ6_ORYLA Oryzias latipes ENSORLG00000002371 N 0.840
PNO1 Takifugu rubripes ENSTRUG00000012470 N 0.820
PNO1 Tetraodon nigroviridis ENSTNIG00000009825 N 0.820
PNO1 Taeniopygia guttata ENSTGUG00000002369 N 0.820
Medtr3g080390 Medicago truncatula Medtr3g080390 N 0.820
XP_002162789.1 Hydra magnipapillata XP_002162789.1 N 0.820
fgenesh2_pm.scaffold_78000001 Branchiostoma floridae fgenesh2_pm.scaffold_78000001 N 0.820
fgenesh2_pg.scaffold_196000015 Branchiostoma floridae fgenesh2_pg.scaffold_196000015 N 0.820
fgenesh1_pg.scaffold_18000119 Nematostella vectensis fgenesh1_pg.scaffold_18000119 N 0.820
AAQ24169 Xenopus laevis AAQ24169 N 0.800
PNO1_CHICK Gallus gallus ENSGALG00000009093 N 0.800
PNO1 Gasterosteus aculeatus ENSGACG00000012047 N 0.800
GP3.070330 Batrachochytrium dendrobatidis GP3.070330 N 0.800
Glyma18g08080.1 Glycine max Glyma18g08080.1 N 0.800
Glyma08g44800.1 Glycine max Glyma08g44800.1 N 0.800
Q8AVH4 Xenopus laevis Q8AVH4 N 0.800
AAH42279 Xenopus laevis AAH42279 N 0.800
estExt_Genewise1.C_260084 Melampsora laricis populina estExt_Genewise1.C_260084 N 0.800
PNO1 Meleagris gallopavo ENSMGAG00000004514 N 0.800
rbp28 Schizosaccharomyces pombe SPAC2C4.11c N 0.800
Glyma18g08100.1 Glycine max Glyma18g08100.1 N 0.800
cassava30594.valid.m1 Manihot esculenta cassava30594.valid.m1 N 0.800
Chlre2_kg.scaffold_20000177 Chlamydomonas reinhardtii Chlre2_kg.scaffold_20000177 N 0.800
pno1 Xenopus tropicalis ENSXETG00000017349 N 0.800
estExt_Genewise1Plus.C_600117 Volvox carteri estExt_Genewise1Plus.C_600117 N 0.800
B9GHH7_POPTR Populus trichocarpa POPTR_0001s47320 N 0.780
FGSG_01345 Fusarium graminearum FGSG_01345 N 0.780
FOXG_00036 Fusarium oxysporum FOXG_00036 N 0.780
e_gw1.8.261.1 Sporobolomyces roseus e_gw1.8.261.1 N 0.780
FVEG_01480 Fusarium verticillioides FVEG_01480 N 0.780
PNO1 Anolis carolinensis ENSACAG00000001218 N 0.780
PNO1 Ornithorhynchus anatinus ENSOANG00000008388 N 0.780
PNO1 Canis familiaris ENSCAFG00000003256 N 0.780
LOC100389955 Callithrix jacchus ENSCJAG00000006564 N 0.780
PNO1_BOVIN Bos taurus ENSBTAG00000010604 N 0.780
ENSOCUG00000006100 Oryctolagus cuniculus ENSOCUG00000006100 N 0.780
XM_001095777.1 Macaca mulatta ENSMMUG00000030357 N 0.780
estExt_fgenesh1_pg.C_sca_1_chr1_3_00036 Nectria haematococca estExt_fgenesh1_pg.C_sca_1_chr1_3_00036 N 0.780
PNO1 Myotis lucifugus ENSMLUG00000010850 N 0.780
Pno1 Dipodomys ordii ENSDORG00000006867 N 0.780
PNO1 Gorilla gorilla ENSGGOG00000009158 N 0.780
e_gw1.18.222.1 Chlorella NC64A e_gw1.18.222.1 N 0.780
PNO1 Homo sapiens ENSG00000115946 N 0.780
LOC100061904 Equus caballus ENSECAG00000011263 N 0.780
UM03495 Ustilago maydis UM03495 N 0.780
Cucsa.201760 Cucumis sativus Cucsa.201760 N 0.780
PNO1 Loxodonta africana ENSLAFG00000000046 N 0.780
PNO1 Microcebus murinus ENSMICG00000010897 N 0.780
PNO1 Erinaceus europaeus ENSEEUG00000009611 N 0.780
cassava7030.valid.m1 Manihot esculenta cassava7030.valid.m1 N 0.780
PNO1 Macropus eugenii ENSMEUG00000004504 N 0.780
Cucsa.041830 Cucumis sativus Cucsa.041830 N 0.780
B9N5M8_POPTR Populus trichocarpa POPTR_0011s16880 N 0.780
Q7YRC8_MACMU Macaca mulatta ENSMMUG00000017461 N 0.780
PNO1 Monodelphis domestica ENSMODG00000003567 N 0.780
28525.m000262 Ricinus communis 28525.m000262 N 0.780
estExt_Genewise1.C_5820041 Capitella teleta estExt_Genewise1.C_5820041 N 0.780
PNO1 Pan troglodytes ENSPTRG00000011999 N 0.780
Ame_R013855 Ailuropoda melanoleuca Ame_R013855 N 0.780
ENSPPYG00000012353 Pongo pygmaeus ENSPPYG00000012353 N 0.780
LjSGA_017760.2 Lotus japonicus LjSGA_017760.2 N 0.780
estExt_fgenesh1_kg.C_140013 Cochliobolus heterostrophus C5 estExt_fgenesh1_kg.C_140013 N 0.780
PNO1 Procavia capensis ENSPCAG00000016146 N 0.780
PNO1 Ochotona princeps ENSOPRG00000009643 N 0.780
PNO1 Pteropus vampyrus ENSPVAG00000012695 N 0.780
ENSOCUG00000022236 Oryctolagus cuniculus ENSOCUG00000022236 N 0.780
PNO1 Tursiops truncatus ENSTTRG00000014002 N 0.780
PNO1 Cavia porcellus ENSCPOG00000010130 N 0.780
YALI0E01122g Yarrowia lipolytica YALI0E01122g N 0.780
Scas_Contig632.19 Saccharomyces castellii Scas_Contig632.19 N 0.780
fgeneshTA2_pg.C_scaffold_14000176 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_14000176 N 0.780
PNO1 Vicugna pacos ENSVPAG00000012083 N 0.780
Pno1 Rattus norvegicus ENSRNOG00000005524 N 0.780
PNO1 Sus scrofa ENSSSCG00000008352 N 0.780
CAGL0K09460g Candida glabrata CAGL0K09460g N 0.760
Cd36_35296 Candida dubliniensis Cd36_35296 N 0.760
Genemark1.5719_g Coccomyxa C 169 Genemark1.5719_g N 0.760
nasonia_NCBI_hmm120183 Nasonia vitripennis nasonia_NCBI_hmm120183 N 0.760
SS1G_04290 Sclerotinia sclerotiorum SS1G_04290 N 0.760
e_gw1.3.1059.1 Mycosphaerella fijiensis e_gw1.3.1059.1 N 0.760
SPRG_02415 Saprolegnia parasitica SPRG_02415 N 0.760
estExt_genewise1_human.C_chr_1.20929 Pichia stipitis estExt_genewise1_human.C_chr_1.20929 N 0.760
fgeneshCV_pg.C_scaffold_11000142 Chlorella vulgaris fgeneshCV_pg.C_scaffold_11000142 N 0.760
PK08146.1 Cannabis sativa PK08146.1 N 0.760
amel4_ncbi_hmm14037 Apis mellifera amel4_ncbi_hmm14037 N 0.760
A7THL8_VANPO Vanderwaltozyma polyspora A7THL8_VANPO N 0.760
s_468317 Phytophthora sojae s_468317 N 0.760
SPOG_00402 Schizosaccharomyces cryophilus SPOG_00402 N 0.760
e_gw1.3.2749.1 Cryphonectria parasitica e_gw1.3.2749.1 N 0.760
DGIL_AUG5s4501g8t1 Acyrtosiphon pisum DGIL_AUG5s4501g8t1 N 0.760
estExt_Genewise1Plus.C_chr_70397 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_70397 N 0.760
CTRG_05813 Candida tropicalis CTRG_05813 N 0.760
CPSG_08784 Coccidioides posadasii CPSG_08784 N 0.760
DEHA0G05258g Debaryomyces hansenii DEHA0G05258g N 0.760
ppa011086m Prunus persica ppa011086m N 0.760
ppa009897m Prunus persica ppa009897m N 0.760
CPAG_01545 Candida parapsilosis CPAG_01545 N 0.760
SAKL0G03740g Lachancea kluyveri SAKL0G03740g N 0.760
BC1G_12211 Botrytis cinerea BC1G_12211 N 0.760
fgenesh1_pm.C_scaffold_5000030 Phytophthora ramorum fgenesh1_pm.C_scaffold_5000030 N 0.760
Pno1 Mus musculus ENSMUSG00000020116 N 0.760
CIMG_07268 Coccidioides immitis CIMG_07268 N 0.760
CLUG_01545 Candida lusitaniae CLUG_01545 N 0.760
SOCG_04140 Schizosaccharomyces octosporus SOCG_04140 N 0.760
Pc14g01220 Penicillium chrysogenum Pc14g01220 N 0.760
PITG_01680 Phytophthora infestans PITG_01680 N 0.760
ZYRO0D11440g Zygosaccharomyces rouxii ZYRO0D11440g N 0.760
SJAG_03872 Schizosaccharomyces japonicus SJAG_03872 N 0.760
GSTUMT00003923001 Tuber melanosporum GSTUMT00003923001 N 0.760
LELG_05249 Lodderomyces elongisporus LELG_05249 N 0.760
MDP0000120063 Malus x domestica MDP0000120063 N 0.760
orf19.7618 Candida albicans orf19.7618 N 0.760
MDP0000754021 Malus x domestica MDP0000754021 N 0.760
MDP0000136407 Malus x domestica MDP0000136407 N 0.760
MDP0000265633 Malus x domestica MDP0000265633 N 0.760
ENSCSAVG00000001303 Ciona savignyi ENSCSAVG00000001303 N 0.740
PHUM356890 Pediculus humanus PHUM356890 N 0.740
XM_001110046.1 Macaca mulatta ENSMMUG00000003556 N 0.740
PNO1 Saccharomyces cerevisiae YOR145C N 0.740
HCAG_04100 Histoplasma capsulatum HCAG_04100 N 0.740
3712.m00082 Tetrahymena thermophila 3712.m00082 N 0.740
23888_YOR145C Saccharomyces bayanus 23888_YOR145C N 0.740
20872_YOR145C Saccharomyces paradoxus 20872_YOR145C N 0.740
EDP42908.1 Malassezia globosa EDP42908.1 N 0.740
ENSCJAG00000022611 Callithrix jacchus ENSCJAG00000022611 N 0.740
Kwal_18864 Kluyveromyces waltii Kwal_18864 N 0.740
KLTH0G02574g Kluyveromyces thermotolerans KLTH0G02574g N 0.740
KLLA0C06446g Kluyveromyces lactis KLLA0C06446g N 0.740
estExt_fgenesh1_pg.C_110137 Monosiga brevicollis estExt_fgenesh1_pg.C_110137 N 0.740
BGIBMGA014064 Bombyx mori BGIBMGA014064 N 0.740
fgenesh1_pm.C_scaffold_14000035 Trichoderma atroviride fgenesh1_pm.C_scaffold_14000035 N 0.740
fgenesh1_pg.C_scaffold_107000027 Daphnia pulex fgenesh1_pg.C_scaffold_107000027 N 0.740
estExt_Genewise1Plus.C_91132 Trichoderma virens estExt_Genewise1Plus.C_91132 N 0.740
fgenesh_newKGs_pm.139__21 Emiliania huxleyi fgenesh_newKGs_pm.139__21 N 0.740
estExt_fgenesh5_pg.C_40050 Trichoderma reesei estExt_fgenesh5_pg.C_40050 N 0.740
Skud_Contig1833.8 Saccharomyces kudriavzevii Skud_Contig1833.8 N 0.740
EFA79428.1 Polysphondylium pallidum EFA79428.1 N 0.740
EAT88982.1 Phaeosphaeria nodorum EAT88982.1 N 0.740
PNO1 Ashbya gossypii PNO1 N 0.740
estExt_fgenesh1_pg.C_190237 Phytophthora capsici estExt_fgenesh1_pg.C_190237 N 0.740
TERG_01665 Trichophyton rubrum TERG_01665 N 0.740
TEQG_07954 Trichophyton equinum TEQG_07954 N 0.740
SNOG_03777 Stagonospora nodorum SNOG_03777 N 0.740
TRV_03730 Trichophyton verrucosum TRV_03730 N 0.740
UREG_07832 Uncinocarpus reesii UREG_07832 N 0.740
ENSCING00000009577 Ciona intestinalis ENSCING00000009577 N 0.740
e_gw1.13.100.1 Volvox carteri e_gw1.13.100.1 N 0.740
WUBG_12774 Wuchereria bancrofti WUBG_12774 N 0.740
PTRG_02803 Pyrenophora tritici repentis PTRG_02803 N 0.740
TESG_04215 Trichophyton tonsurans TESG_04215 N 0.740
MCYG_07269 Microsporum canis MCYG_07269 N 0.740
Bm1_42995 Brugia malayi Bm1_42995 N 0.740
LOAG_05624 Loa loa LOAG_05624 N 0.740
ARB_00984 Arthroderma benhamiae ARB_00984 N 0.740
BDBG_01721 Blastomyces dermatitidis BDBG_01721 N 0.740
MGYG_04767 Microsporum gypseum MGYG_04767 N 0.740
PGUG_02960 Candida guilliermondii PGUG_02960 N 0.740
e_gw1.4.614.1 Micromonas pusilla e_gw1.4.614.1 N 0.740
GM23025 Drosophila sechellia FBgn0177893 N 0.725
GK20148 Drosophila willistoni FBgn0222145 N 0.725
GD17488 Drosophila simulans FBgn0189040 N 0.725
GG19285 Drosophila erecta FBgn0111489 N 0.725
GE17874 Drosophila yakuba FBgn0068478 N 0.725
l(1)G0004 Drosophila melanogaster FBgn0027334 N 0.725
GF20246 Drosophila ananassae FBgn0097253 N 0.725
20359_YOR145C Saccharomyces mikatae 20359_YOR145C N 0.725
e_gw1.7.528.1 Ostreococcus RCC809 e_gw1.7.528.1 N 0.720
e_gwEuk.7.409.1 Ostreococcus lucimarinus e_gwEuk.7.409.1 N 0.720
EDI_198550 Entamoeba dispar EDI_198550 N 0.720
EHI_065870 Entamoeba histolytica EHI_065870 N 0.720
estExt_fgenesh2_pm.C_sca_70005 Lottia gigantea estExt_fgenesh2_pm.C_sca_70005 N 0.720
SPPG_04498 Spizellomyces punctatus SPPG_04498 N 0.720
GSPATP00020703001 Paramecium tetraurelia GSPATP00020703001 N 0.720
0700010277 Ostreococcus tauri 0700010277 N 0.720
Medtr5g095530 Medicago truncatula Medtr5g095530 N 0.720
GSPATP00021981001 Paramecium tetraurelia GSPATP00021981001 N 0.720
estExt_Genewise1Plus.C_10659 Myceliophthora thermophila estExt_Genewise1Plus.C_10659 N 0.720
GID1.0042265 Dictyostelium purpureum GID1.0042265 N 0.720
pno1 Dictyostelium discoideum DDB_G0287557 N 0.720
PABG_01374 Paracoccidioides brasiliensis PABG_01374 N 0.720
GLRG_03940 Colletotrichum graminicola GLRG_03940 N 0.712
GA11169-RA Drosophila pseudoobscura FBgn0071224 N 0.706
GJ15820 Drosophila virilis FBgn0203007 N 0.706
GH12628 Drosophila grimshawi FBgn0120107 N 0.706
mgf006621m Mimulus guttatus mgf006621m N 0.700
estExt_Genewise1.C_10689 Thielavia terrestris estExt_Genewise1.C_10689 N 0.700
estExt_Genewise1Plus.C_430054 Neurospora tetrasperma estExt_Genewise1Plus.C_430054 N 0.700
AMSG_02733 Thecamonas trahens AMSG_02733 N 0.700
GRMZM2G085005 Zea mays GRMZM2G085005 N 0.700
GRMZM2G139198 Zea mays GRMZM2G139198 N 0.700
MGG_05136 Magnaporthe oryzae MGG_05136 N 0.700
PDK_20s1554761g001 Phoenix dactylifera PDK_20s1554761g001 N 0.700
BGIOSIBCE009391 Oryza indica BGIOSIBCE009391 N 0.700
LOC_Os01g57910 Oryza sativa LOC_Os01g57910 N 0.700
PNO1_IXOSC Ixodes scapularis ISCW023560 N 0.700
Y53C12B.2 Caenorhabditis elegans Y53C12B.2 N 0.700
LOC_Os03g02420 Oryza sativa LOC_Os03g02420 N 0.700
SB03G036840 Sorghum bicolor Sb03g036840 N 0.700
27316 Aureococcus anophagefferens 27316 N 0.700
CRE05188 Caenorhabditis remanei CRE05188 N 0.700
BRADI2G52180 Brachypodium distachyon BRADI2G52180 N 0.700
NCU07956 Neurospora crassa NCU07956 N 0.700
ANIA_05785 Aspergillus nidulans CADANIAG00003265 N 0.700
CBG01042 Caenorhabditis briggsae CBG01042 N 0.700
CBN06104 Caenorhabditis brenneri CBN06104 N 0.700
e_gw1.3.666.1 Neurospora discreta e_gw1.3.666.1 N 0.700