CBG01042 (Caenorhabditis briggsae)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 CBG01042 T18233_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CBG01042 KH 200 249

Links

Other KH family RBPs
Other Caenorhabditis briggsae RBPs

41 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CRE05188 Caenorhabditis remanei CRE05188 N 1.000
Y53C12B.2 Caenorhabditis elegans Y53C12B.2 N 1.000
CBN06104 Caenorhabditis brenneri CBN06104 N 1.000
CJA15618 Caenorhabditis japonica CJA15618 N 0.980
Bm1_42995 Brugia malayi Bm1_42995 N 0.780
LOAG_05624 Loa loa LOAG_05624 N 0.780
WUBG_12774 Wuchereria bancrofti WUBG_12774 N 0.780
PPA25260 Pristionchus pacificus PPA25260 N 0.740
GG19285 Drosophila erecta FBgn0111489 N 0.725
GM23025 Drosophila sechellia FBgn0177893 N 0.725
GD17488 Drosophila simulans FBgn0189040 N 0.725
GF20246 Drosophila ananassae FBgn0097253 N 0.725
GK20148 Drosophila willistoni FBgn0222145 N 0.725
GE17874 Drosophila yakuba FBgn0068478 N 0.725
l(1)G0004 Drosophila melanogaster FBgn0027334 N 0.725
pno1 Danio rerio ENSDARG00000008502 N 0.720
RO3G_00885 Rhizopus oryzae RO3G_00885 N 0.720
XP_798188.2 Strongylocentrotus purpuratus XP_798188.2 N 0.720
XP_001202155.1 Strongylocentrotus purpuratus XP_001202155.1 N 0.720
XP_001202160.1 Strongylocentrotus purpuratus XP_001202160.1 N 0.720
estExt_fgenesh1_pg.C_110137 Monosiga brevicollis estExt_fgenesh1_pg.C_110137 N 0.720
BGIBMGA014064 Bombyx mori BGIBMGA014064 N 0.720
RO3G_05288 Rhizopus oryzae RO3G_05288 N 0.720
XP_791733.2 Strongylocentrotus purpuratus XP_791733.2 N 0.720
Q6VBQ6_ORYLA Oryzias latipes ENSORLG00000002371 N 0.720
GJ15820 Drosophila virilis FBgn0203007 N 0.706
GH12628 Drosophila grimshawi FBgn0120107 N 0.706
GA11169-RA Drosophila pseudoobscura FBgn0071224 N 0.706
nasonia_NCBI_hmm120183 Nasonia vitripennis nasonia_NCBI_hmm120183 N 0.700
ENSCING00000009577 Ciona intestinalis ENSCING00000009577 N 0.700
ENSCSAVG00000001303 Ciona savignyi ENSCSAVG00000001303 N 0.700
amel4_ncbi_hmm14037 Apis mellifera amel4_ncbi_hmm14037 N 0.700
fgenesh1_pg.scaffold_18000119 Nematostella vectensis fgenesh1_pg.scaffold_18000119 N 0.700
PNO1 Taeniopygia guttata ENSTGUG00000002369 N 0.700
PNO1 Tetraodon nigroviridis ENSTNIG00000009825 N 0.700
PNO1 Takifugu rubripes ENSTRUG00000012470 N 0.700
PNO1 Gasterosteus aculeatus ENSGACG00000012047 N 0.700
estExt_Genewise1Plus.C_10658 Mucor circinelloides estExt_Genewise1Plus.C_10658 N 0.700
fgenesh2_pg.scaffold_196000015 Branchiostoma floridae fgenesh2_pg.scaffold_196000015 N 0.700
estExt_Genewise1Plus.C_250095 Phycomyces blakesleeanus estExt_Genewise1Plus.C_250095 N 0.700
fgenesh2_pm.scaffold_78000001 Branchiostoma floridae fgenesh2_pm.scaffold_78000001 N 0.700