SB05G006890 (Sorghum bicolor)
La,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF05383 (La)
PF00076 (RRM_1) 		IPR006630
IPR000504 		Sb05g006890 T23514_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Sb05g006890.1 La 120 179
Sb05g006890.1 RRM 210 251
Sb05g006890.1 RRM 258 290

Links

Other La,RRM family RBPs
Other Sorghum bicolor RBPs

14 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BRADI4G20900 Brachypodium distachyon BRADI4G20900 N 0.813
BRADI4G40040 Brachypodium distachyon BRADI4G40040 N 0.831
PK11097.1 Cannabis sativa PK11097.1 N 0.706
MDP0000319338 Malus x domestica MDP0000319338 N 0.719
BGIOSIBCE034058 Oryza indica BGIOSIBCE034058 N 0.811
BGIOSIBCE036105 Oryza indica BGIOSIBCE036105 N 0.790
LOC_Os12g12360 Oryza sativa LOC_Os12g12360 N 0.790
LOC_Os11g14300 Oryza sativa LOC_Os11g14300 N 0.707
ppa005181m Prunus persica ppa005181m N 0.706
30042.m000490 Ricinus communis 30042.m000490 N 0.711
SB08G007220 Sorghum bicolor Sb08g007220 N 0.797
GSVIVG00038251001 Vitis vinifera GSVIVG00038251001 N 0.701
GRMZM2G072339 Zea mays GRMZM2G072339 N 0.970
GRMZM2G171518 Zea mays GRMZM2G171518 N 0.770