CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CPSG_05597
(
Coccidioides posadasii
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
CPSG_05597
T25991_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CPSG_05597T0
RanBP ZF
141
157
ANWVCPICTFSNPVPSN
CPSG_05597T0
RanBP ZF
239
262
TCPRCTFANHPSLLECEMCGAPLK
Links
Other
RanBP ZF
family RBPs
Other
Coccidioides posadasii
RBPs
22 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R000335
Ailuropoda melanoleuca
Ame_R000335
N
0.000
DND1
Bos taurus
ENSBTAG00000018845
N
0.000
LOC100396355
Callithrix jacchus
ENSCJAG00000016345
N
0.000
ENSCAFG00000005888
Canis familiaris
ENSCAFG00000005888
N
0.000
ENSCPOG00000009192
Cavia porcellus
ENSCPOG00000009192
N
0.000
ENSDNOG00000013017
Dasypus novemcinctus
ENSDNOG00000013017
N
0.000
Dnd1
Dipodomys ordii
ENSDORG00000014552
N
0.000
ENSETEG00000005397
Echinops telfairi
ENSETEG00000005397
N
0.000
LOC100061778
Equus caballus
ENSECAG00000011014
N
0.000
ENSEEUG00000004338
Erinaceus europaeus
ENSEEUG00000004338
N
0.000
DND1
Gorilla gorilla
ENSGGOG00000023180
N
0.000
ENSGGOG00000013166
Gorilla gorilla
ENSGGOG00000013166
N
0.000
ENSLAFG00000008161
Loxodonta africana
ENSLAFG00000008161
N
0.000
ENSMMUG00000004480
Macaca mulatta
ENSMMUG00000004480
N
0.000
ENSMEUG00000016276
Macropus eugenii
ENSMEUG00000016276
N
0.000
ENSMODG00000011340
Monodelphis domestica
ENSMODG00000011340
N
0.000
Dnd1
Mus musculus
ENSMUSG00000044595
N
0.000
ENSMUSG00000089721
Mus musculus
ENSMUSG00000089721
N
0.000
ENSMLUG00000003195
Myotis lucifugus
ENSMLUG00000003195
N
0.000
ENSOCUG00000004240
Oryctolagus cuniculus
ENSOCUG00000004240
N
0.000
XR_019943.1
Pan troglodytes
ENSPTRG00000017324
N
0.000
ENSPPYG00000015863
Pongo pygmaeus
ENSPPYG00000015863
N
0.000
Dnd1
Rattus norvegicus
ENSRNOG00000016894
N
0.000
ENSSARG00000007411
Sorex araneus
ENSSARG00000007411
N
0.000
ENSSTOG00000002000
Spermophilus tridecemlineatus
ENSSTOG00000002000
N
0.000
ENSSSCG00000014374
Sus scrofa
ENSSSCG00000014374
N
0.000
ENSTBEG00000006754
Tupaia belangeri
ENSTBEG00000006754
N
0.000
ENSTTRG00000001755
Tursiops truncatus
ENSTTRG00000001755
N
0.000
ENSTTRG00000010411
Tursiops truncatus
ENSTTRG00000010411
N
0.000