CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
Pc13g06240
(
Penicillium chrysogenum
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
Pc13g06240
T27838_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pc13g06240.t1
RanBP ZF
143
160
NATWICPICSFSNPVPSN
Pc13g06240.t1
RanBP ZF
234
257
PCPRCTFVNHPSLVECEICGAPLS
Links
Other
RanBP ZF
family RBPs
Other
Penicillium chrysogenum
RBPs
26 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R010681
Ailuropoda melanoleuca
Ame_R010681
I
0.000
KHDRBS2
Anolis carolinensis
ENSACAG00000006691
I
0.000
KHDRBS3
Anolis carolinensis
ENSACAG00000012042
I
0.000
AGAP003356
Anopheles gambiae
AGAP003356
N
0.000
A4FV24_BOVIN
Bos taurus
ENSBTAG00000002181
I
0.000
KHDRBS2
Bos taurus
ENSBTAG00000043990
I
0.000
fgenesh2_pg.scaffold_166000064
Branchiostoma floridae
fgenesh2_pg.scaffold_166000064
I
0.000
LOC100395662
Callithrix jacchus
ENSCJAG00000001766
I
0.000
LOC100399263
Callithrix jacchus
ENSCJAG00000004331
I
0.000
KHDRBS2
Canis familiaris
ENSCAFG00000002470
I
0.000
KHDRBS3
Canis familiaris
ENSCAFG00000001166
I
0.000
KHDRBS3
Cavia porcellus
ENSCPOG00000000342
I
0.000
KHDRBS2
Cavia porcellus
ENSCPOG00000025621
I
0.000
KHDRBS2
Dasypus novemcinctus
ENSDNOG00000014028
I
0.000
Khdrbs2
Dipodomys ordii
ENSDORG00000005701
I
0.000
KHDRBS3
Echinops telfairi
ENSETEG00000004701
I
0.000
LOC100056966
Equus caballus
ENSECAG00000021541
I
0.000
KHDRBS2
Erinaceus europaeus
ENSEEUG00000003986
I
0.000
KHDRBS3
Gallus gallus
ENSGALG00000016203
I
0.000
KHDRBS2
Gallus gallus
ENSGALG00000016276
I
0.000
KHDRBS2
Gasterosteus aculeatus
ENSGACG00000006097
I
0.000
KHDRBS2
Gorilla gorilla
ENSGGOG00000025068
I
0.000
Q6J4Q8_9PRIM
Gorilla gorilla
ENSGGOG00000000940
I
0.000
KHDRBS2
Homo sapiens
ENSG00000112232
D
0.000
KHDRBS3
Homo sapiens
ENSG00000131773
D
0.000
KHDRBS2
Loxodonta africana
ENSLAFG00000006655
I
0.000
KHDRBS3
Loxodonta africana
ENSLAFG00000004849
I
0.000
Q6J4Q6_MACMU
Macaca mulatta
ENSMMUG00000022248
I
0.000
KHDRBS2
Macaca mulatta
ENSMMUG00000003329
I
0.000
KHDRBS3
Meleagris gallopavo
ENSMGAG00000012888
I
0.000
KHDRBS2
Meleagris gallopavo
ENSMGAG00000013877
I
0.000
KHDRBS3
Monodelphis domestica
ENSMODG00000000975
I
0.000
KHDRBS2
Monodelphis domestica
ENSMODG00000018714
I
0.000
Khdrbs3
Mus musculus
ENSMUSG00000022332
I
0.000
Khdrbs2
Mus musculus
ENSMUSG00000026058
I
0.000
KHDRBS3
Ochotona princeps
ENSOPRG00000000404
I
0.000
KHDRBS3
Ornithorhynchus anatinus
ENSOANG00000014074
I
0.000
KHDRBS3
Oryctolagus cuniculus
ENSOCUG00000000743
I
0.000
KHDRBS2
Oryctolagus cuniculus
ENSOCUG00000012344
I
0.000
KHDRBS3
Otolemur garnettii
ENSOGAG00000005150
I
0.000
Q6J4Q9_PANTR
Pan troglodytes
ENSPTRG00000020608
I
0.000
KHDRBS2
Pan troglodytes
ENSPTRG00000018311
I
0.000
Khdrbs2
Rattus norvegicus
ENSRNOG00000012284
I
0.000
KHDRBS3
Spermophilus tridecemlineatus
ENSSTOG00000008710
I
0.000
KHDRBS2
Sus scrofa
ENSSSCG00000001490
I
0.000
KHDRBS3
Sus scrofa
ENSSSCG00000005941
I
0.000
KHDRBS3
Taeniopygia guttata
ENSTGUG00000012611
I
0.000
KHDRBS2
Taeniopygia guttata
ENSTGUG00000012786
I
0.000
KHDRBS2
Tarsius syrichta
ENSTSYG00000007203
I
0.000
KHDRBS3
Tupaia belangeri
ENSTBEG00000004773
I
0.000
KHDRBS3
Tursiops truncatus
ENSTTRG00000001270
I
0.000
KHDRBS2
Tursiops truncatus
ENSTTRG00000005591
I
0.000
KHDRBS2
Vicugna pacos
ENSVPAG00000001469
I
0.000
khdrbs3
Xenopus tropicalis
ENSXETG00000009227
I
0.000