CHGG_09128 (Chaetomium globosum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CHGG_09128 T28635_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CHGT_09128 RRM 9 71
CHGT_09128 RRM 112 177

Links

Other RRM family RBPs
Other Chaetomium globosum RBPs

31 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB02127.1 Alternaria brassicicola AB02127.1 N 0.770
fgenesh1_pm.00168_#_248 Aspergillus carbonarius fgenesh1_pm.00168_#_248 N 0.785
ACLA_037960 Aspergillus clavatus CADACLAG00003195 N 0.785
AFLA_032760 Aspergillus flavus CADAFLAG00002651 N 0.742
ANIA_04978 Aspergillus nidulans CADANIAG00005417 N 0.773
An16g03890 Aspergillus niger CADANGAG00012860 N 0.785
AO090003000544 Aspergillus oryzae CADAORAG00001164 N 0.762
BC1G_09648 Botrytis cinerea BC1G_09648 N 0.841
CIMG_03560 Coccidioides immitis CIMG_03560 N 0.740
CPSG_02395 Coccidioides posadasii CPSG_02395 N 0.740
GLRG_08760 Colletotrichum graminicola GLRG_08760 N 0.892
estExt_Genewise1.C_90037 Cryphonectria parasitica estExt_Genewise1.C_90037 N 0.822
FOXG_05959 Fusarium oxysporum FOXG_05959 N 0.841
FVEG_03827 Fusarium verticillioides FVEG_03827 N 0.841
estExt_Genewise1Plus.C_51423 Myceliophthora thermophila estExt_Genewise1Plus.C_51423 N 0.908
estExt_Genewise1Plus.C_80545 Mycosphaerella fijiensis estExt_Genewise1Plus.C_80545 N 0.774
estExt_fgenesh1_pm.C_chr_20271 Mycosphaerella graminicola estExt_fgenesh1_pm.C_chr_20271 N 0.766
e_gw1.18.2147.1 Nectria haematococca e_gw1.18.2147.1 N 0.838
NCU07069 Neurospora crassa NCU07069 N 0.893
estExt_fgenesh3_kg.C_60024 Neurospora discreta estExt_fgenesh3_kg.C_60024 N 0.893
estExt_fgenesh2_kg.C_20245 Neurospora tetrasperma estExt_fgenesh2_kg.C_20245 N 0.893
Pc13g10700 Penicillium chrysogenum Pc13g10700 N 0.746
Pa_4_8210 Podospora anserina Pa_4_8210 N 0.846
PTRG_11856 Pyrenophora tritici repentis PTRG_11856 N 0.789
SS1G_14437 Sclerotinia sclerotiorum SS1G_14437 N 0.848
e_gw1.5.1788.1 Thielavia terrestris e_gw1.5.1788.1 N 0.930
fgenesh2_kg.10__63__CBWT_CBYP_CBYT_CCAH_1370_0_CBYT4195.b1 Trichoderma atroviride fgenesh2_kg.10__63__CBWT_CBYP_CBYT_CCAH_1370_0_CBYT4195.b1 N 0.864
estExt_fgenesh5_pg.C_160051 Trichoderma reesei estExt_fgenesh5_pg.C_160051 N 0.833
estExt_Genewise1.C_21744 Trichoderma virens estExt_Genewise1.C_21744 N 0.848
TEQG_05050 Trichophyton equinum TEQG_05050 N 0.725
VDAG_10099 Verticillium dahliae VDAG_10099 N 0.854