PK02111.1 (Cannabis sativa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PK02111.1 T31626_0.6 Cannabis sativa genome (2012-Feb-20)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PK02111.1 RRM 55 125

Links

Other RRM family RBPs
Other Cannabis sativa RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_Genewise1Plus.C_30445 Agaricus bisporus estExt_Genewise1Plus.C_30445 N 0.704
BRADI3G35650 Brachypodium distachyon BRADI3G35650 N 0.761
CC1G_06273 Coprinopsis cinerea CC1G_06273 N 0.704
Cucsa.364800 Cucumis sativus Cucsa.364800 N 0.732
DEHA0A05764g Debaryomyces hansenii DEHA0A05764g N 0.718
Glyma02g29190.1 Glycine max Glyma02g29190.1 N 0.817
Glyma09g17080.1 Glycine max Glyma09g17080.1 N 0.817
MDP0000340057 Malus x domestica MDP0000340057 N 0.817
cassava18017.valid.m1 Manihot esculenta cassava18017.valid.m1 N 0.718
Medtr8g129780 Medicago truncatula Medtr8g129780 N 0.789
Medtr1g137330 Medicago truncatula Medtr1g137330 N 0.789
e_gw1.10.335.1 Mucor circinelloides e_gw1.10.335.1 N 0.775
LOC_Os08g31810 Oryza sativa LOC_Os08g31810 N 0.775
gw1.198.122.1 Physcomitrella patens gw1.198.122.1 N 0.746
e_gw1.35.197.1 Physcomitrella patens e_gw1.35.197.1 N 0.704
B9HW06_POPTR Populus trichocarpa POPTR_0010s24120 N 0.761
ppa025985m Prunus persica ppa025985m N 0.859
29428.m000321 Ricinus communis 29428.m000321 N 0.789
Sb03g045720 Sorghum bicolor Sb03g045720 N 0.817
GSTUMT00006382001 Tuber melanosporum GSTUMT00006382001 N 0.718
GSVIVG00021851001 Vitis vinifera GSVIVG00021851001 N 0.789
GRMZM2G056350 Zea mays GRMZM2G056350 N 0.789