An12g00490 (Aspergillus niger)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CADANGAG00009498 T33569_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CADANGAP00009319 RRM 250 320

Links

Other RRM family RBPs
Other Aspergillus niger RBPs

172 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh2_kg.C_140159 Agaricus bisporus estExt_fgenesh2_kg.C_140159 N 0.789
Ame_R008665 Ailuropoda melanoleuca Ame_R008665 N 0.775
PPIL4 Anolis carolinensis ENSACAG00000006936 N 0.775
AGAP008136 Anopheles gambiae AGAP008136 N 0.817
amel4_ncbi_hmm11961 Apis mellifera amel4_ncbi_hmm11961 N 0.746
amel4_ncbi_hmm35613 Apis mellifera amel4_ncbi_hmm35613 N 0.746
ARB_04672 Arthroderma benhamiae ARB_04672 N 0.958
fgenesh1_pm.00868_#_101 Aspergillus carbonarius fgenesh1_pm.00868_#_101 N 1.000
ACLA_065360 Aspergillus clavatus CADACLAG00006149 N 0.972
AFLA_071340 Aspergillus flavus CADAFLAG00008558 N 0.972
AFUA_7G02170 Aspergillus fumigatus CADAFUAG00001177 N 0.986
ANIA_09095 Aspergillus nidulans CADANIAG00009519 N 0.958
AO090038000594 Aspergillus oryzae CADAORAG00009343 N 0.972
ATEG_01850 Aspergillus terreus CADATEAG00001841 N 0.958
BDBG_04009 Blastomyces dermatitidis BDBG_04009 N 0.986
A6QP53_BOVIN Bos taurus ENSBTAG00000016980 N 0.775
estExt_fgenesh2_pm.C_1170007 Branchiostoma floridae estExt_fgenesh2_pm.C_1170007 N 0.746
Q6JDI1_CANFA Canis familiaris ENSCAFG00000000379 N 0.775
CAOG_07850 Capsaspora owczarzaki CAOG_07850 N 0.718
PPIL4 Cavia porcellus ENSCPOG00000014614 N 0.775
estExt_fgeneshCV_pg.C_40316 Chlorella vulgaris estExt_fgeneshCV_pg.C_40316 N 0.000
ENSCSAVG00000010619 Ciona savignyi ENSCSAVG00000010619 N 0.732
CIMG_07762 Coccidioides immitis CIMG_07762 N 1.000
CPSG_09333 Coccidioides posadasii CPSG_09333 N 1.000
e_gw1.4.423.1 Coccomyxa C 169 e_gw1.4.423.1 N 0.000
estExt_Genewise1Plus.C_61472 Cryphonectria parasitica estExt_Genewise1Plus.C_61472 N 0.817
CNBG_1409 Cryptococcus neoformans CNBG_1409 N 0.789
ppil4 Danio rerio ENSDARG00000043854 N 0.746
PPIL4 Equus caballus ENSECAG00000021819 N 0.775
FGSG_04479 Fusarium graminearum FGSG_04479 N 0.817
FOXG_13736 Fusarium oxysporum FOXG_13736 N 0.817
FVEG_11166 Fusarium verticillioides FVEG_11166 N 0.817
PPIL4 Gallus gallus ENSGALG00000012364 N 0.789
PPIL4 Gasterosteus aculeatus ENSGACG00000006639 N 0.761
PPIL4 Gorilla gorilla ENSGGOG00000009686 N 0.775
HCAG_04417 Histoplasma capsulatum HCAG_04417 N 0.986
PPIL4 Homo sapiens ENSG00000131013 N 0.775
LOAG_08216 Loa loa LOAG_08216 N 0.746
gw1.13.70.1 Lottia gigantea gw1.13.70.1 N 0.732
PPIL4 Loxodonta africana ENSLAFG00000026804 N 0.775
PPIL4 Macaca mulatta ENSMMUG00000023067 N 0.775
MGG_10681 Magnaporthe oryzae MGG_10681 N 0.845
PPIL4 Meleagris gallopavo ENSMGAG00000012596 N 0.789
PPIL4 Microcebus murinus ENSMICG00000006287 N 0.775
MCYG_06073 Microsporum canis MCYG_06073 N 0.958
MGYG_05886 Microsporum gypseum MGYG_05886 N 0.944
PPIL4 Monodelphis domestica ENSMODG00000016825 N 0.775
e_gw1.6.80.1 Monosiga brevicollis e_gw1.6.80.1 N 0.775
Ppil4 Mus musculus ENSMUSG00000015757 N 0.775
estExt_Genewise1.C_30053 Myceliophthora thermophila estExt_Genewise1.C_30053 N 0.803
fgenesh1_pm.C_scaffold_9000117 Mycosphaerella fijiensis fgenesh1_pm.C_scaffold_9000117 N 0.873
estExt_Genewise1Plus.C_chr_40303 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_40303 N 0.887
PPIL4 Myotis lucifugus ENSMLUG00000002766 N 0.775
nasonia_NCBI_hmm783174 Nasonia vitripennis nasonia_NCBI_hmm783174 N 0.761
fgenesh1_pm.sca_11_chr8_3_0000173 Nectria haematococca fgenesh1_pm.sca_11_chr8_3_0000173 N 0.803
e_gw.42.57.1 Nematostella vectensis e_gw.42.57.1 N 0.803
NFIA_114890 Neosartorya fischeri CADNFIAG00010434 N 0.986
NCLIV_045550 Neospora caninum NCLIV_045550 N 0.704
NCU10166 Neurospora crassa NCU10166 N 0.817
estExt_Genewise1Plus.C_12820 Neurospora discreta estExt_Genewise1Plus.C_12820 N 0.817
gw1.1.256.1 Neurospora tetrasperma gw1.1.256.1 N 0.817
PPIL4 Ochotona princeps ENSOPRG00000005619 N 0.775
ENSOANG00000001063 Ornithorhynchus anatinus ENSOANG00000001063 N 0.775
PPIL4 Oryctolagus cuniculus ENSOCUG00000007696 N 0.775
PPIL4 Oryzias latipes ENSORLG00000015310 N 0.775
PPIL4 Otolemur garnettii ENSOGAG00000014153 N 0.775
PPIL4 Pan troglodytes ENSPTRG00000018692 N 0.775
PABG_01156 Paracoccidioides brasiliensis PABG_01156 N 0.986
PHUM268300 Pediculus humanus PHUM268300 N 0.803
Pc21g11960 Penicillium chrysogenum Pc21g11960 N 0.972
PMAA_010740 Penicillium marneffei PMAA_010740 N 0.958
EAT81165.2 Phaeosphaeria nodorum EAT81165.2 N 0.915
e_gw1.4.2113.1 Pleurotus ostreatus e_gw1.4.2113.1 N 0.761
Pa_2_13850 Podospora anserina Pa_2_13850 N 0.817
estExt_fgenesh3_pg.C_910016 Postia placenta estExt_fgenesh3_pg.C_910016 N 0.803
PPIL4 Procavia capensis ENSPCAG00000008203 N 0.775
PPIL4 Pteropus vampyrus ENSPVAG00000000746 N 0.775
PTRG_04608 Pyrenophora tritici repentis PTRG_04608 N 0.915
Ppil4 Rattus norvegicus ENSRNOG00000015552 N 0.775
PTSG_07932 Salpingoeca rosetta PTSG_07932 N 0.746
fgenesh1_pm.C_scaffold_1000049 Schizophyllum commune fgenesh1_pm.C_scaffold_1000049 N 0.775
SPOG_01415 Schizosaccharomyces cryophilus SPOG_01415 N 0.789
SJAG_00470 Schizosaccharomyces japonicus SJAG_00470 N 0.789
SOCG_02586 Schizosaccharomyces octosporus SOCG_02586 N 0.775
cyp6 Schizosaccharomyces pombe SPBC17G9.05 N 0.817
PPIL4 Sorex araneus ENSSARG00000011244 N 0.775
SNOG_11457 Stagonospora nodorum SNOG_11457 N 0.915
PPIL4 Taeniopygia guttata ENSTGUG00000010655 N 0.775
PPIL4 Takifugu rubripes ENSTRUG00000006670 N 0.803
PPIL4 Tetraodon nigroviridis ENSTNIG00000002706 N 0.803
TGVEG_068650 Toxoplasma gondii TGVEG_068650 N 0.718
TGGT1_083150 Toxoplasma gondii TGGT1_083150 N 0.718
estExt_Genewise1Plus.C_11662 Tremella mesenterica estExt_Genewise1Plus.C_11662 N 0.803
e_gw1.11.236.1 Trichoderma atroviride e_gw1.11.236.1 N 0.803
estExt_GeneWisePlus.C_270056 Trichoderma reesei estExt_GeneWisePlus.C_270056 N 0.803
fgenesh1_pm.C_scaffold_3000471 Trichoderma virens fgenesh1_pm.C_scaffold_3000471 N 0.803
TEQG_07016 Trichophyton equinum TEQG_07016 N 0.958
TERG_06028 Trichophyton rubrum TERG_06028 N 0.958
TRV_03115 Trichophyton verrucosum TRV_03115 N 0.958
GSTUMT00009813001 Tuber melanosporum GSTUMT00009813001 N 0.930
PPIL4 Tursiops truncatus ENSTTRG00000006014 N 0.775
UREG_02113 Uncinocarpus reesii UREG_02113 N 1.000
VDAG_02606 Verticillium dahliae VDAG_02606 N 0.789
PPIL4 Vicugna pacos ENSVPAG00000005157 N 0.775
WUBG_04730 Wuchereria bancrofti WUBG_04730 N 0.746
ppil4 Xenopus tropicalis ENSXETG00000021385 N 0.761