CIRBP (Cavia porcellus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCPOG00000019403 T35881_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000014762 RRM 8 77

Links

Other RRM family RBPs
Other Cavia porcellus RBPs

50 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R005750 Ailuropoda melanoleuca Ame_R005750 I 0.718
Ame_R011907 Ailuropoda melanoleuca Ame_R011907 I 0.944
CIRBP Anolis carolinensis ENSACAG00000000441 I 0.944
RBM3 Anolis carolinensis ENSACAG00000013718 I 0.718
Q3SZN4_BOVIN Bos taurus ENSBTAG00000007480 I 0.944
LOC100394350 Callithrix jacchus ENSCJAG00000005504 I 0.944
XM_549003.1 Canis familiaris ENSCAFG00000016002 I 0.718
CIRBP Canis familiaris ENSCAFG00000019506 I 0.944
ENSCAFG00000023295 Canis familiaris ENSCAFG00000023295 I 0.704
RBM3 Cavia porcellus ENSCPOG00000003553 I 0.718
zgc:112425 Danio rerio ENSDARG00000042049 N 0.761
cirbp Danio rerio ENSDARG00000013351 N 0.789
Rbm3 Dipodomys ordii ENSDORG00000000182 I 0.718
LOC100051736 Equus caballus ENSECAG00000024257 I 0.718
CIRBP Felis catus ENSFCAG00000013724 I 0.958
RBM3 Felis catus ENSFCAG00000002245 I 0.718
Q45KQ2_CHICK Gallus gallus ENSGALG00000012225 I 0.930
CIRBP Gorilla gorilla ENSGGOG00000002338 I 0.944
RBM3 Gorilla gorilla ENSGGOG00000005864 I 0.704
CIRBP Homo sapiens ENSG00000099622 I 0.944
RBM3 Homo sapiens ENSG00000102317 D 0.704
CIRBP Loxodonta africana ENSLAFG00000032156 I 0.944
RBM3 Loxodonta africana ENSLAFG00000007003 I 0.718
LOC706175 Macaca mulatta ENSMMUG00000022101 I 0.944
CIRBP Meleagris gallopavo ENSMGAG00000010253 I 0.944
CIRBP Microcebus murinus ENSMICG00000015962 I 0.944
CIRBP Monodelphis domestica ENSMODG00000005290 I 0.958
Cirbp Mus musculus ENSMUSG00000045193 I 0.930
Rbm3 Mus musculus ENSMUSG00000031167 I 0.718
CIRBP Ornithorhynchus anatinus ENSOANG00000012230 I 0.944
ENSOCUG00000002271 Oryctolagus cuniculus ENSOCUG00000002271 I 0.732
XR_020876.1 Pan troglodytes ENSPTRG00000010192 I 0.915
XR_023694.1 Pan troglodytes ENSPTRG00000021864 I 0.704
ENSPPYG00000020314 Pongo pygmaeus ENSPPYG00000020314 I 0.704
RBM3 Pteropus vampyrus ENSPVAG00000015630 I 0.718
CIRBP Pteropus vampyrus ENSPVAG00000005629 I 0.944
Rbm3 Rattus norvegicus ENSRNOG00000005387 I 0.718
Cirbp Rattus norvegicus ENSRNOG00000015999 I 0.930
CIRBP Sus scrofa ENSSSCG00000013427 I 0.944
CIRBP Taeniopygia guttata ENSTGUG00000000884 I 0.944
CIRBP Tursiops truncatus ENSTTRG00000011049 I 0.944
RBM3 Tursiops truncatus ENSTTRG00000008587 I 0.704
Q9DED4 Xenopus laevis Q9DED4 I 0.887
O93235 Xenopus laevis O93235 N 0.831
BAB19129 Xenopus laevis BAB19129 I 0.887
BAA31861 Xenopus laevis BAA31861 N 0.831
AAH54250 Xenopus laevis AAH54250 I 0.887
AAH41204 Xenopus laevis AAH41204 N 0.831
AAG09816 Xenopus laevis AAG09816 N 0.831
cirbp Xenopus tropicalis ENSXETG00000003281 I 0.831