CELF5 (Oryzias latipes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSORLG00000004600 T40121_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL5
M157_0.6 		Homo sapiens UGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00166 		0.895
BRUNOL6
M178_0.6 		Homo sapiens UGUGDKG RNAcompete
Ray et al.(2013)
RNCMPT00187 		0.810
BRUNOL4
M004_0.6 		Homo sapiens KGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00004 		0.782
unc-75
M079_0.6 		Caenorhabditis elegans UGUUGUD RNAcompete
Ray et al.(2013)
RNCMPT00081 		0.739
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000005783 RRM 24 93
ENSORLP00000005783 RRM 112 180
ENSORLP00000005783 RRM 384 454

Links

Other RRM family RBPs
Other Oryzias latipes RBPs

94 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CBG08763 Caenorhabditis briggsae CBG08763 N 0.000
CJA28132 Caenorhabditis japonica CJA28132 N 0.000
CJA28002 Caenorhabditis japonica CJA28002 N 0.000
CJA27243 Caenorhabditis japonica CJA27243 N 0.000
CJA23650 Caenorhabditis japonica CJA23650 N 0.000
CJA21290 Caenorhabditis japonica CJA21290 N 0.000
CJA18092 Caenorhabditis japonica CJA18092 N 0.000
CJA15515 Caenorhabditis japonica CJA15515 N 0.000
CJA13676 Caenorhabditis japonica CJA13676 N 0.000
CJA13138 Caenorhabditis japonica CJA13138 N 0.000
CJA12566 Caenorhabditis japonica CJA12566 N 0.000
CJA10177 Caenorhabditis japonica CJA10177 N 0.000
CJA07934 Caenorhabditis japonica CJA07934 N 0.000
CJA02757 Caenorhabditis japonica CJA02757 N 0.000
CJA02670 Caenorhabditis japonica CJA02670 N 0.000
CJA00525 Caenorhabditis japonica CJA00525 N 0.000
CRE09308 Caenorhabditis remanei CRE09308 N 0.000
CRE13684 Caenorhabditis remanei CRE13684 N 0.000