SART3 (Takifugu rubripes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTRUG00000014173 T42345_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000036246 RRM 679 749
ENSTRUP00000036246 RRM 776 845
ENSTRUP00000036247 RRM 653 723
ENSTRUP00000036247 RRM 750 819

Links

Other RRM family RBPs
Other Takifugu rubripes RBPs

4 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002870025.1 Arabidopsis lyrata fgenesh2_kg.7__2489__AT4G18120.1 N 0.000
XM_002893514.1 Arabidopsis lyrata Al_scaffold_0001_2998 N 0.000
ML5 Arabidopsis thaliana AT1G29400-TAIR-G N 0.000
ML2 Arabidopsis thaliana AT2G42890-TAIR-G N 0.000
BRADI5G08580 Brachypodium distachyon BRADI5G08580 N 0.000
BRADI3G44380 Brachypodium distachyon BRADI3G44380 N 0.000
BRADI3G10967 Brachypodium distachyon BRADI3G10967 N 0.000
BRADI1G52280 Brachypodium distachyon BRADI1G52280 N 0.000
PK15886.1 Cannabis sativa PK15886.1 N 0.000
PK25465.1 Cannabis sativa PK25465.1 N 0.000
PK19379.1 Cannabis sativa PK19379.1 N 0.000
Cucsa.185450 Cucumis sativus Cucsa.185450 N 0.000
Cucsa.047430 Cucumis sativus Cucsa.047430 N 0.000
Cucsa.349210 Cucumis sativus Cucsa.349210 N 0.000
Glyma15g23420.1 Glycine max Glyma15g23420.1 N 0.000
Glyma08g01040.1 Glycine max Glyma08g01040.1 N 0.000
Glyma08g42230.1 Glycine max Glyma08g42230.1 N 0.000
Glyma09g11630.1 Glycine max Glyma09g11630.1 N 0.000
Glyma18g12730.1 Glycine max Glyma18g12730.1 N 0.000
chr6.CM0037.1500.nc Lotus japonicus chr6.CM0037.1500.nc N 0.000
cassava42352.valid.m1 Manihot esculenta cassava42352.valid.m1 N 0.000
cassava42354.valid.m1 Manihot esculenta cassava42354.valid.m1 N 0.000
cassava44897.m1 Manihot esculenta cassava44897.m1 N 0.000
cassava42355.valid.m1 Manihot esculenta cassava42355.valid.m1 N 0.000
cassava12910.valid.m1 Manihot esculenta cassava12910.valid.m1 N 0.000
cassava13647.valid.m1 Manihot esculenta cassava13647.valid.m1 N 0.000
cassava13648.valid.m1 Manihot esculenta cassava13648.valid.m1 N 0.000
cassava37261.valid.m1 Manihot esculenta cassava37261.valid.m1 N 0.000
cassava6429.valid.m1 Manihot esculenta cassava6429.valid.m1 N 0.000
cassava42353.valid.m1 Manihot esculenta cassava42353.valid.m1 N 0.000
cassava37262.valid.m1 Manihot esculenta cassava37262.valid.m1 N 0.000
Medtr2g056620 Medicago truncatula Medtr2g056620 N 0.000
Medtr3g151260 Medicago truncatula Medtr3g151260 N 0.000
mgf005765m Mimulus guttatus mgf005765m N 0.000
mgf014747m Mimulus guttatus mgf014747m N 0.000
mgf015667m Mimulus guttatus mgf015667m N 0.000
mgf023970m Mimulus guttatus mgf023970m N 0.000
mgf000415m Mimulus guttatus mgf000415m N 0.000
BGIOSIBCE008451 Oryza indica BGIOSIBCE008451 N 0.000
BGIOSIBCE006715 Oryza indica BGIOSIBCE006715 N 0.000
BGIOSIBCE007174 Oryza indica BGIOSIBCE007174 N 0.000
LOC_Os02g48790 Oryza sativa LOC_Os02g48790 N 0.000
LOC_Os02g31290 Oryza sativa LOC_Os02g31290 N 0.000
LOC_Os02g21430 Oryza sativa LOC_Os02g21430 N 0.000
estExt_gwp_gw1.C_780034 Physcomitrella patens estExt_gwp_gw1.C_780034 N 0.000
e_gw1.271.39.1 Physcomitrella patens e_gw1.271.39.1 N 0.000
e_gw1.78.82.1 Physcomitrella patens e_gw1.78.82.1 N 0.000
B9GZ23_POPTR Populus trichocarpa POPTR_0003s16110 N 0.000
B9GT36_POPTR Populus trichocarpa POPTR_0002s06070 N 0.000
B9GMT5_POPTR Populus trichocarpa POPTR_0001s13030 N 0.000
B9H813_POPTR Populus trichocarpa POPTR_0005s22370 N 0.000
B9I403_POPTR Populus trichocarpa POPTR_0012s10900 N 0.000
ppa000845m Prunus persica ppa000845m N 0.000
ppa001327m Prunus persica ppa001327m N 0.000
ppa000997m Prunus persica ppa000997m N 0.000
ppa001307m Prunus persica ppa001307m N 0.000
29693.m002077 Ricinus communis 29693.m002077 N 0.000
30147.m014409 Ricinus communis 30147.m014409 N 0.000
28350.m000106 Ricinus communis 28350.m000106 N 0.000
e_gw1.12.24.1 Selaginella moellendorfii e_gw1.12.24.1 N 0.000
estExt_fgenesh2_pg.C_120305 Selaginella moellendorfii estExt_fgenesh2_pg.C_120305 N 0.000
SB06G014670 Sorghum bicolor Sb06g014670 N 0.000
SB10G000350 Sorghum bicolor Sb10g000350 N 0.000
SB04G021130 Sorghum bicolor Sb04g021130 N 0.000
GSVIVG00021379001 Vitis vinifera GSVIVG00021379001 N 0.000
GSVIVG00001086001 Vitis vinifera GSVIVG00001086001 N 0.000
GSVIVG00008646001 Vitis vinifera GSVIVG00008646001 N 0.000
GRMZM2G451716 Zea mays GRMZM2G451716 N 0.000
GRMZM2G012302 Zea mays GRMZM2G012302 N 0.000
GRMZM2G004455 Zea mays GRMZM2G004455 N 0.000
GRMZM2G154229 Zea mays GRMZM2G154229 N 0.000