CG11266 (Drosophila melanogaster)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0031883 T43049_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0088577 RRM 30 100
FBpp0088577 RRM 199 255
FBpp0088578 RRM 30 100
FBpp0088578 RRM 199 255
FBpp0088579 RRM 239 308
FBpp0088579 RRM 337 407
FBpp0088579 RRM 506 562
FBpp0088580 RRM 30 100
FBpp0088580 RRM 199 255
FBpp0088581 RRM 30 100
FBpp0088581 RRM 199 255
FBpp0088582 RRM 30 100
FBpp0088582 RRM 199 255
FBpp0088583 RRM 239 308
FBpp0088583 RRM 337 407
FBpp0088583 RRM 506 562

Links

Other RRM family RBPs
Other Drosophila melanogaster RBPs

58 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DGIL_AUG5s7518g10t1 Acyrtosiphon pisum DGIL_AUG5s7518g10t1 N 0.780
AAEL005046 Aedes aegypti AAEL005046 N 0.866
Ame_R004270 Ailuropoda melanoleuca Ame_R004270 N 0.734
RBM39 Anolis carolinensis ENSACAG00000006436 N 0.737
AGAP008433 Anopheles gambiae AGAP008433 N 0.854
amel4_ncbi_hmm11379 Apis mellifera amel4_ncbi_hmm11379 N 0.844
Q2HJD8_BOVIN Bos taurus ENSBTAG00000003949 N 0.734
e_gw.57.85.1 Branchiostoma floridae e_gw.57.85.1 N 0.000
B0KWM7_CALJA Callithrix jacchus ENSCJAG00000017535 N 0.734
RBM39 Canis familiaris ENSCAFG00000008327 N 0.734
RBM39 Cavia porcellus ENSCPOG00000014625 N 0.000
ENSCPOG00000021775 Cavia porcellus ENSCPOG00000021775 N 0.000
CpipJ_CPIJ019416 Culex pipiens CpipJ_CPIJ019416 N 0.884
CpipJ_CPIJ014704 Culex pipiens CpipJ_CPIJ014704 N 0.884
CPIJ019416 Culex quinquefasciatus CPIJ019416 N 0.884
CPIJ014704 Culex quinquefasciatus CPIJ014704 N 0.884
rbm39b Danio rerio ENSDARG00000041853 N 0.717
rbm39a Danio rerio ENSDARG00000011613 N 0.742
estExt_Genewise1Plus.C_150014 Daphnia pulex estExt_Genewise1Plus.C_150014 N 0.793
RBM39 Dasypus novemcinctus ENSDNOG00000025219 N 0.000
GF14957 Drosophila ananassae FBgn0091982 N 0.980
GG10454 Drosophila erecta FBgn0102763 N 0.990
GH13506 Drosophila grimshawi FBgn0120982 N 0.940
GI10246 Drosophila mojavensis FBgn0133011 N 0.965
GA10876-RA Drosophila pseudoobscura FBgn0070932 N 0.960
GM16278 Drosophila sechellia FBgn0171194 N 1.000
GD23448 Drosophila simulans FBgn0194830 N 1.000
GJ18017 Drosophila virilis FBgn0205182 N 0.945
GK15272 Drosophila willistoni FBgn0217277 N 0.960
GE14328 Drosophila yakuba FBgn0231943 N 0.985
RBM39 Echinops telfairi ENSETEG00000016295 N 0.000
RBM39 Equus caballus ENSECAG00000013423 N 0.734
RBM39 Gallus gallus ENSGALG00000001550 N 0.737
RBM23 Gasterosteus aculeatus ENSGACG00000003376 N 0.000
RBM23 Gasterosteus aculeatus ENSGACG00000002797 N 0.700
RBM39 Gorilla gorilla ENSGGOG00000003950 N 0.719
RBM39 Homo sapiens ENSG00000131051 N 0.734
estExt_Genewise1.C_sca_90322 Lottia gigantea estExt_Genewise1.C_sca_90322 N 0.754
RBM39 Loxodonta africana ENSLAFG00000010346 N 0.734
RBM39 Meleagris gallopavo ENSMGAG00000001509 N 0.732
RBM39 Microcebus murinus ENSMICG00000001668 N 0.734
RBM39 Monodelphis domestica ENSMODG00000001557 N 0.726
Rbm39 Mus musculus ENSMUSG00000027620 N 0.734
fgenesh1_pg.scaffold_245000036 Nematostella vectensis fgenesh1_pg.scaffold_245000036 N 0.000
B7NZJ5_RABIT Oryctolagus cuniculus ENSOCUG00000007050 N 0.734
RBM23 Oryzias latipes ENSORLG00000009919 N 0.727
RBM23 Oryzias latipes ENSORLG00000010370 N 0.732
RBM39 Otolemur garnettii ENSOGAG00000011227 N 0.000
RBM39 Pan troglodytes ENSPTRG00000013449 N 0.734
PHUM394230 Pediculus humanus PHUM394230 N 0.809
ENSPPYG00000010963 Pongo pygmaeus ENSPPYG00000010963 N 0.734
RBM39 Procavia capensis ENSPCAG00000008764 N 0.000
RBM39 Pteropus vampyrus ENSPVAG00000014944 N 0.734
Rbm39 Rattus norvegicus ENSRNOG00000019848 N 0.734
RBM39 Sorex araneus ENSSARG00000007673 N 0.734
RBM39 Sus scrofa ENSSSCG00000007309 N 0.734
RBM39 Taeniopygia guttata ENSTGUG00000003048 N 0.737
RBM23 Takifugu rubripes ENSTRUG00000011352 N 0.732
RBM39 Tarsius syrichta ENSTSYG00000005605 N 0.734
RBM23 Tetraodon nigroviridis ENSTNIG00000005223 N 0.000
RBM23 Tetraodon nigroviridis ENSTNIG00000017904 N 0.732
RBM39 Tupaia belangeri ENSTBEG00000017320 N 0.000
RBM39 Tursiops truncatus ENSTTRG00000017039 N 0.734
AAH75146 Xenopus laevis AAH75146 N 0.719
AAH77813 Xenopus laevis AAH77813 N 0.714