cassava25244.valid.m1 (Manihot esculenta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 cassava25244.valid.m1 T49235_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
cassava25244.valid.m1 RRM 6 73

Links

Other RRM family RBPs
Other Manihot esculenta RBPs

32 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R015152 Ailuropoda melanoleuca Ame_R015152 N 0.000
RNPS1 Anolis carolinensis ENSACAG00000004088 N 0.000
amel4_ncbi_hmm8263 Apis mellifera amel4_ncbi_hmm8263 N 0.000
RNPS1_BOVIN Bos taurus ENSBTAG00000009969 N 0.000
LOC100403592 Callithrix jacchus ENSCJAG00000014969 N 0.000
RNPS1 Canis familiaris ENSCAFG00000019397 N 0.000
RNPS1 Cavia porcellus ENSCPOG00000002066 N 0.000
RNPS1 Choloepus hoffmanni ENSCHOG00000004866 N 0.000
Rnps1 Dipodomys ordii ENSDORG00000001755 N 0.000
LOC100065738 Equus caballus ENSECAG00000023288 N 0.000
RNPS1 Erinaceus europaeus ENSEEUG00000005933 N 0.000
RNPS1 Felis catus ENSFCAG00000007690 N 0.000
RNPS1 Gallus gallus ENSGALG00000009288 N 0.000
RNPS1 Gasterosteus aculeatus ENSGACG00000005641 N 0.000
RNPS1 Gasterosteus aculeatus ENSGACG00000011261 N 0.000
ENSGGOG00000014275 Gorilla gorilla ENSGGOG00000014275 N 0.000
RNPS1 Homo sapiens ENSG00000205937 N 0.000
RNPS1 Loxodonta africana ENSLAFG00000000728 N 0.000
LOC695816 Macaca mulatta ENSMMUG00000019238 N 0.000
RNPS1 Macropus eugenii ENSMEUG00000008882 N 0.000
RNPS1 Meleagris gallopavo ENSMGAG00000010042 N 0.000
RNPS1 Monodelphis domestica ENSMODG00000015891 N 0.000
Rnps1 Mus musculus ENSMUSG00000034681 N 0.000
nasonia_NCBI_hmm458514 Nasonia vitripennis nasonia_NCBI_hmm458514 N 0.000
RNPS1 Ochotona princeps ENSOPRG00000016422 N 0.000
ENSOCUG00000027449 Oryctolagus cuniculus ENSOCUG00000027449 N 0.000
RNPS1 Oryctolagus cuniculus ENSOCUG00000004387 N 0.000
ENSOCUG00000021516 Oryctolagus cuniculus ENSOCUG00000021516 N 0.000
RNPS1 Oryzias latipes ENSORLG00000008033 N 0.000
RNPS1 Oryzias latipes ENSORLG00000018532 N 0.000
RNPS1 Pan troglodytes ENSPTRG00000031310 N 0.000
RNPS1 Procavia capensis ENSPCAG00000004514 N 0.000
RNPS1 Pteropus vampyrus ENSPVAG00000005105 N 0.000
Rnps1 Rattus norvegicus ENSRNOG00000008703 N 0.000
ENSRNOG00000021566 Rattus norvegicus ENSRNOG00000021566 N 0.000
LOC688526 Rattus norvegicus ENSRNOG00000027239 N 0.000
RNPS1 Sorex araneus ENSSARG00000001577 N 0.000
RNPS1 Spermophilus tridecemlineatus ENSSTOG00000013200 N 0.000
RNPS1 Sus scrofa ENSSSCG00000008048 N 0.000
RNPS1 Taeniopygia guttata ENSTGUG00000003237 N 0.000
RNPS1 Takifugu rubripes ENSTRUG00000008602 N 0.000
RNPS1 Takifugu rubripes ENSTRUG00000017161 N 0.000
RNPS1 Tarsius syrichta ENSTSYG00000001629 N 0.000
RNPS1 Tetraodon nigroviridis ENSTNIG00000007411 N 0.000
RNPS1 Tetraodon nigroviridis ENSTNIG00000009753 N 0.000
RNPS1 Tupaia belangeri ENSTBEG00000009098 N 0.000
RNPS1 Tursiops truncatus ENSTTRG00000008220 N 0.000
AAH84646 Xenopus laevis AAH84646 N 0.000
AAI06520 Xenopus laevis AAI06520 N 0.000
Q3KPW1 Xenopus laevis Q3KPW1 N 0.000
Q5XG24 Xenopus laevis Q5XG24 N 0.000
rnps1 Xenopus tropicalis ENSXETG00000024439 N 0.000