Glyma20g24130.1 (Glycine max)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Glyma20g24130.1 T52953_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma20g24130.1 RRM 205 274
Glyma20g24130.1 RRM 309 378
Glyma20g24130.1 RRM 506 560

Links

Other RRM family RBPs
Other Glycine max RBPs

31 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002886041.1 Arabidopsis lyrata fgenesh2_kg.3__3274__AT2G16940.1 N 0.796
XM_002873382.1 Arabidopsis lyrata Al_scaffold_0006_891 N 0.761
AT2G16940 Arabidopsis thaliana AT2G16940-TAIR-G N 0.788
AT5G09880 Arabidopsis thaliana AT5G09880-TAIR-G N 0.736
BRADI1G74820 Brachypodium distachyon BRADI1G74820 N 0.787
BRADI3G27480 Brachypodium distachyon BRADI3G27480 N 0.786
PK01525.1 Cannabis sativa PK01525.1 N 0.832
PK20903.1 Cannabis sativa PK20903.1 N 0.751
Cucsa.370400 Cucumis sativus Cucsa.370400 N 0.810
Cucsa.101320 Cucumis sativus Cucsa.101320 N 0.772
Glyma10g42890.1 Glycine max Glyma10g42890.1 N 0.974
Glyma08g15370.1 Glycine max Glyma08g15370.1 N 0.756
Glyma06g15370.1 Glycine max Glyma06g15370.1 N 0.772
Glyma05g32080.1 Glycine max Glyma05g32080.1 N 0.756
MDP0000319817 Malus x domestica MDP0000319817 N 0.785
cassava37705.valid.m1 Manihot esculenta cassava37705.valid.m1 N 0.827
Medtr4g141620 Medicago truncatula Medtr4g141620 N 0.766
mgf012385m Mimulus guttatus mgf012385m N 0.772
LOC_Os03g05830 Oryza sativa LOC_Os03g05830 N 0.811
PDK_20s1549391g001 Phoenix dactylifera PDK_20s1549391g001 N 0.701
B9H6Q0_POPTR Populus trichocarpa POPTR_0005s19200 N 0.712
ppa003064m Prunus persica ppa003064m N 0.786
ppa002854m Prunus persica ppa002854m N 0.766
30183.m001297 Ricinus communis 30183.m001297 N 0.841
SB01G021020 Sorghum bicolor Sb01g021020 N 0.796
SB01G046740 Sorghum bicolor Sb01g046740 N 0.801
GSVIVG00023998001 Vitis vinifera GSVIVG00023998001 N 0.832
GSVIVG00022281001 Vitis vinifera GSVIVG00022281001 N 0.721
GRMZM2G071589 Zea mays GRMZM2G071589 N 0.796
GRMZM2G076597 Zea mays GRMZM2G076597 N 0.786
AC233901.1_FG001 Zea mays AC233901.1_FG001 N 0.816