gw1.9.256.1 (Chlorella NC64A)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 gw1.9.256.1 T53407_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
gw1.9.256.1 RRM 52 120

Links

Other RRM family RBPs
Other Chlorella NC64A RBPs

53 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002864051.1 Arabidopsis lyrata scaffold_801545.1 N 0.725
ATPABN1 Arabidopsis thaliana AT5G51120-TAIR-G N 0.725
BRADI1G45640 Brachypodium distachyon BRADI1G45640 N 0.710
BRADI3G58600 Brachypodium distachyon BRADI3G58600 N 0.739
PK11764.1 Cannabis sativa PK11764.1 N 0.725
PK23225.1 Cannabis sativa PK23225.1 N 0.739
e_gwW.3.612.1 Chlamydomonas reinhardtii e_gwW.3.612.1 N 0.797
estExt_Genewise1.C_260003 Chlorella vulgaris estExt_Genewise1.C_260003 N 0.841
estExt_Genewise1.C_260068 Coccomyxa C 169 estExt_Genewise1.C_260068 N 0.841
Cucsa.104260 Cucumis sativus Cucsa.104260 N 0.710
Cucsa.093920 Cucumis sativus Cucsa.093920 N 0.768
Cucsa.093720 Cucumis sativus Cucsa.093720 N 0.739
Glyma05g31030.1 Glycine max Glyma05g31030.1 N 0.739
Glyma08g14240.1 Glycine max Glyma08g14240.1 N 0.739
Glyma08g18970.1 Glycine max Glyma08g18970.1 N 0.710
Glyma20g34100.1 Glycine max Glyma20g34100.1 N 0.754
Glyma10g33490.1 Glycine max Glyma10g33490.1 N 0.754
Glyma15g06030.1 Glycine max Glyma15g06030.1 N 0.725
MDP0000243651 Malus x domestica MDP0000243651 N 0.739
cassava18862.valid.m1 Manihot esculenta cassava18862.valid.m1 N 0.754
cassava44009.valid.m1 Manihot esculenta cassava44009.valid.m1 N 0.754
cassava31160.valid.m1 Manihot esculenta cassava31160.valid.m1 N 0.725
cassava28879.valid.m1 Manihot esculenta cassava28879.valid.m1 N 0.739
Medtr1g087160 Medicago truncatula Medtr1g087160 N 0.739
EuGene.0000060218 Micromonas pusilla EuGene.0000060218 N 0.768
mgf007186m Mimulus guttatus mgf007186m N 0.725
mgf023117m Mimulus guttatus mgf023117m N 0.725
mgf006490m Mimulus guttatus mgf006490m N 0.725
mgf005737m Mimulus guttatus mgf005737m N 0.725
BGIOSIBCE008718 Oryza indica BGIOSIBCE008718 N 0.739
LOC_Os02g52140 Oryza sativa LOC_Os02g52140 N 0.739
LOC_Os06g11620 Oryza sativa LOC_Os06g11620 N 0.739
gwEuk.6.483.1 Ostreococcus lucimarinus gwEuk.6.483.1 N 0.710
estExt_genewise1.C_Chr_06.00010404 Ostreococcus tauri estExt_genewise1.C_Chr_06.00010404 N 0.739
PDK_20s1311211g001 Phoenix dactylifera PDK_20s1311211g001 N 0.754
estExt_fgenesh1_pg.C_4220012 Physcomitrella patens estExt_fgenesh1_pg.C_4220012 N 0.783
e_gw1.85.66.1 Physcomitrella patens e_gw1.85.66.1 N 0.768
estExt_Genewise1.C_4330008 Physcomitrella patens estExt_Genewise1.C_4330008 N 0.783
estExt_Genewise1.C_30470 Physcomitrella patens estExt_Genewise1.C_30470 N 0.783
B9NAP4_POPTR Populus trichocarpa POPTR_0012s11480 N 0.754
B9ICE3_POPTR Populus trichocarpa POPTR_0015s12230 N 0.768
ppa010052m Prunus persica ppa010052m N 0.754
ppa011157m Prunus persica ppa011157m N 0.725
29772.m000320 Ricinus communis 29772.m000320 N 0.725
30147.m014359 Ricinus communis 30147.m014359 N 0.768
30147.m014356 Ricinus communis 30147.m014356 N 0.754
29806.m000954 Ricinus communis 29806.m000954 N 0.710
pab2 Schizosaccharomyces pombe SPBC16E9.12c N 0.714
e_gw1.0.1424.1 Selaginella moellendorfii e_gw1.0.1424.1 N 0.768
e_gw1.26.703.1 Selaginella moellendorfii e_gw1.26.703.1 N 0.783
Sb04g027340 Sorghum bicolor Sb04g027340 N 0.739
estExt_Genewise1.C_10557 Volvox carteri estExt_Genewise1.C_10557 N 0.783
GRMZM2G108919 Zea mays GRMZM2G108919 N 0.739