EuGene.0000060218 (Micromonas pusilla)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 EuGene.0000060218 T51677_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
EuGene.0000060218 RRM 40 108

Links

Other RRM family RBPs
Other Micromonas pusilla RBPs

57 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Medtr1g087160 Medicago truncatula Medtr1g087160 N 0.797
estExt_Genewise1.C_260068 Coccomyxa C 169 estExt_Genewise1.C_260068 N 0.783
mgf005737m Mimulus guttatus mgf005737m N 0.783
mgf006490m Mimulus guttatus mgf006490m N 0.783
estExt_Genewise1.C_260003 Chlorella vulgaris estExt_Genewise1.C_260003 N 0.783
Glyma20g34100.1 Glycine max Glyma20g34100.1 N 0.783
30147.m014356 Ricinus communis 30147.m014356 N 0.783
Glyma10g33490.1 Glycine max Glyma10g33490.1 N 0.783
ppa010052m Prunus persica ppa010052m N 0.783
cassava44009.valid.m1 Manihot esculenta cassava44009.valid.m1 N 0.783
MDP0000243651 Malus x domestica MDP0000243651 N 0.768
30147.m014359 Ricinus communis 30147.m014359 N 0.768
cassava18862.valid.m1 Manihot esculenta cassava18862.valid.m1 N 0.768
cassava28879.valid.m1 Manihot esculenta cassava28879.valid.m1 N 0.768
Cucsa.093920 Cucumis sativus Cucsa.093920 N 0.768
PK23225.1 Cannabis sativa PK23225.1 N 0.768
gw1.9.256.1 Chlorella NC64A gw1.9.256.1 N 0.768
B9NAP4_POPTR Populus trichocarpa POPTR_0012s11480 N 0.754
Glyma05g31030.1 Glycine max Glyma05g31030.1 N 0.754
B9ICE3_POPTR Populus trichocarpa POPTR_0015s12230 N 0.754
XM_002864051.1 Arabidopsis lyrata scaffold_801545.1 N 0.754
ATPABN1 Arabidopsis thaliana AT5G51120-TAIR-G N 0.754
cassava31160.valid.m1 Manihot esculenta cassava31160.valid.m1 N 0.754
e_gwW.3.612.1 Chlamydomonas reinhardtii e_gwW.3.612.1 N 0.754
Glyma08g14240.1 Glycine max Glyma08g14240.1 N 0.754
e_gw1.26.703.1 Selaginella moellendorfii e_gw1.26.703.1 N 0.754
Cucsa.104260 Cucumis sativus Cucsa.104260 N 0.754
Cucsa.093720 Cucumis sativus Cucsa.093720 N 0.754
LOC_Os02g52140 Oryza sativa LOC_Os02g52140 N 0.739
29772.m000320 Ricinus communis 29772.m000320 N 0.739
BRADI3G58600 Brachypodium distachyon BRADI3G58600 N 0.739
GRMZM2G108919 Zea mays GRMZM2G108919 N 0.739
mgf023117m Mimulus guttatus mgf023117m N 0.739
ppa011157m Prunus persica ppa011157m N 0.739
BGIOSIBCE008718 Oryza indica BGIOSIBCE008718 N 0.739
GSVIVG00004460001 Vitis vinifera GSVIVG00004460001 N 0.739
LOC_Os06g11620 Oryza sativa LOC_Os06g11620 N 0.725
estExt_Genewise1.C_10557 Volvox carteri estExt_Genewise1.C_10557 N 0.725
mgf007186m Mimulus guttatus mgf007186m N 0.725
e_gw1.0.1424.1 Selaginella moellendorfii e_gw1.0.1424.1 N 0.725
estExt_fgenesh1_pg.C_4220012 Physcomitrella patens estExt_fgenesh1_pg.C_4220012 N 0.725
MDP0000562891 Malus x domestica MDP0000562891 N 0.725
PDK_20s1311211g001 Phoenix dactylifera PDK_20s1311211g001 N 0.725
Sb04g027340 Sorghum bicolor Sb04g027340 N 0.725
SB01G028780 Sorghum bicolor Sb01g028780 N 0.725
MDP0000623378 Malus x domestica MDP0000623378 N 0.725
PK11764.1 Cannabis sativa PK11764.1 N 0.725
e_gw1.85.66.1 Physcomitrella patens e_gw1.85.66.1 N 0.725
Glyma15g06030.1 Glycine max Glyma15g06030.1 N 0.710
estExt_Genewise1.C_4330008 Physcomitrella patens estExt_Genewise1.C_4330008 N 0.710
estExt_Genewise1.C_30470 Physcomitrella patens estExt_Genewise1.C_30470 N 0.710
estExt_genewise1.C_Chr_06.00010404 Ostreococcus tauri estExt_genewise1.C_Chr_06.00010404 N 0.710
POPTR_0005s07440 Populus trichocarpa POPTR_0005s07440 N 0.710
29806.m000954 Ricinus communis 29806.m000954 N 0.710
Medtr4g120660 Medicago truncatula Medtr4g120660 N 0.710
gwEuk.6.483.1 Ostreococcus lucimarinus gwEuk.6.483.1 N 0.710
gw1.6.1594.1 Ostreococcus RCC809 gw1.6.1594.1 N 0.710