Medtr8g129780 (Medicago truncatula)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Medtr8g129780 T54612_0.6 PlantGDB (2010-Oct-15)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Medtr8g129780.1 RRM 53 123

Links

Other RRM family RBPs
Other Medicago truncatula RBPs

23 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002871058.1 Arabidopsis lyrata scaffold_600404.1 N 0.761
AT5G04600 Arabidopsis thaliana AT5G04600-TAIR-G N 0.761
BRADI3G35650 Brachypodium distachyon BRADI3G35650 N 0.761
PK02111.1 Cannabis sativa PK02111.1 N 0.789
CC1G_06273 Coprinopsis cinerea CC1G_06273 N 0.746
Cucsa.364800 Cucumis sativus Cucsa.364800 N 0.831
Glyma09g17080.1 Glycine max Glyma09g17080.1 N 0.930
Glyma02g29190.1 Glycine max Glyma02g29190.1 N 0.930
MDP0000340057 Malus x domestica MDP0000340057 N 0.845
cassava18017.valid.m1 Manihot esculenta cassava18017.valid.m1 N 0.775
Medtr1g137330 Medicago truncatula Medtr1g137330 N 0.958
mgf009918m Mimulus guttatus mgf009918m N 0.803
e_gw1.10.335.1 Mucor circinelloides e_gw1.10.335.1 N 0.718
LOC_Os08g31810 Oryza sativa LOC_Os08g31810 N 0.803
gw1.198.122.1 Physcomitrella patens gw1.198.122.1 N 0.718
B9HW06_POPTR Populus trichocarpa POPTR_0010s24120 N 0.845
ppa025985m Prunus persica ppa025985m N 0.859
RO3G_08088 Rhizopus oryzae RO3G_08088 N 0.761
29428.m000321 Ricinus communis 29428.m000321 N 0.845
Sb03g045720 Sorghum bicolor Sb03g045720 N 0.775
SPPG_07834 Spizellomyces punctatus SPPG_07834 N 0.718
GSVIVG00021851001 Vitis vinifera GSVIVG00021851001 N 0.859
GRMZM2G056350 Zea mays GRMZM2G056350 N 0.732