BGIBMGA005893 (Bombyx mori)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BGIBMGA005893 T54988_0.6 SilkDB (2008-Apr-11)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
aret_CONSTRUCT
M229_0.6 		RNAcompete CONSTRUCTS UKUGUGU RNAcompete
Ray et al.(2013)
RNCMPT00270 		0.775
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
BGIBMGA005893 RRM 192 262

Links

Other RRM family RBPs
Other Bombyx mori RBPs

27 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL003979 Aedes aegypti AAEL003979 I 0.958
CELF6 Anolis carolinensis ENSACAG00000006079 I 0.958
amel4_ncbi_hmm2201 Apis mellifera amel4_ncbi_hmm2201 I 0.817
fgenesh2_pm.scaffold_186000008 Branchiostoma floridae fgenesh2_pm.scaffold_186000008 I 0.958
LOC100391960 Callithrix jacchus ENSCJAG00000020663 I 0.845
NCBI_GNO_268900001 Daphnia pulex NCBI_GNO_268900001 I 1.000
gw1.77.52.1 Daphnia pulex gw1.77.52.1 I 1.000
GF19661 Drosophila ananassae FBgn0096668 I 0.775
GG23781 Drosophila erecta FBgn0115920 I 0.775
GI17947 Drosophila mojavensis FBgn0140687 I 0.761
GM26796 Drosophila sechellia FBgn0181649 I 0.775
GD23834 Drosophila simulans FBgn0195204 I 0.775
136083 Helobdella robusta 136083 I 0.831
BRUNOL6 Homo sapiens ENSG00000140488 D 0.887
CELF3 Homo sapiens ENSG00000159409 I 0.873
ISCW010799 Ixodes scapularis ISCW010799 I 0.972
ISCW008885 Ixodes scapularis ISCW008885 I 0.789
CELF5 Macaca mulatta ENSMMUG00000015513 I 0.944
HEXA Macaca mulatta ENSMMUG00000010687 I 0.887
e_gw.982.9.1 Nematostella vectensis e_gw.982.9.1 I 0.789
SNAPOd2T00007754001 Oikopleura dioica SNAPOd2T00007754001 I 0.789
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.958
CELF6 Pan troglodytes ENSPTRG00000034360 I 0.887
Ppa-etr-1 Pristionchus pacificus PPA28330 I 0.718
CELF3 Tetraodon nigroviridis ENSTNIG00000001919 I 0.915
WUBG_04928 Wuchereria bancrofti WUBG_04928 I 0.915
ENSXETG00000021745 Xenopus tropicalis ENSXETG00000021745 I 0.887