MDP0000340057 (Malus x domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 MDP0000340057 T57652_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000340057 RRM 71 141

Links

Other RRM family RBPs
Other Malus x domestica RBPs

21 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002871058.1 Arabidopsis lyrata scaffold_600404.1 N 0.704
AT5G04600 Arabidopsis thaliana AT5G04600-TAIR-G N 0.704
BRADI3G35650 Brachypodium distachyon BRADI3G35650 N 0.761
PK02111.1 Cannabis sativa PK02111.1 N 0.817
Cucsa.364800 Cucumis sativus Cucsa.364800 N 0.817
Glyma09g17080.1 Glycine max Glyma09g17080.1 N 0.859
Glyma02g29190.1 Glycine max Glyma02g29190.1 N 0.859
cassava18017.valid.m1 Manihot esculenta cassava18017.valid.m1 N 0.761
Medtr8g129780 Medicago truncatula Medtr8g129780 N 0.845
Medtr1g137330 Medicago truncatula Medtr1g137330 N 0.859
mgf009918m Mimulus guttatus mgf009918m N 0.746
e_gw1.10.335.1 Mucor circinelloides e_gw1.10.335.1 N 0.718
LOC_Os08g31810 Oryza sativa LOC_Os08g31810 N 0.775
gw1.198.122.1 Physcomitrella patens gw1.198.122.1 N 0.718
B9HW06_POPTR Populus trichocarpa POPTR_0010s24120 N 0.817
ppa025985m Prunus persica ppa025985m N 0.930
29428.m000321 Ricinus communis 29428.m000321 N 0.859
SPRG_01506 Saprolegnia parasitica SPRG_01506 N 0.718
Sb03g045720 Sorghum bicolor Sb03g045720 N 0.789
GSVIVG00021851001 Vitis vinifera GSVIVG00021851001 N 0.831
GRMZM2G056350 Zea mays GRMZM2G056350 N 0.789