Pa_4_8210 (Podospora anserina)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Pa_4_8210 T57931_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Pa_4_8210 RRM 9 71
Pa_4_8210 RRM 111 177

Links

Other RRM family RBPs
Other Podospora anserina RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB02127.1 Alternaria brassicicola AB02127.1 N 0.726
fgenesh1_pm.00168_#_248 Aspergillus carbonarius fgenesh1_pm.00168_#_248 N 0.777
ACLA_037960 Aspergillus clavatus CADACLAG00003195 N 0.792
AFLA_032760 Aspergillus flavus CADAFLAG00002651 N 0.758
ANIA_04978 Aspergillus nidulans CADANIAG00005417 N 0.765
An16g03890 Aspergillus niger CADANGAG00012860 N 0.777
AO090003000544 Aspergillus oryzae CADAORAG00001164 N 0.777
BC1G_09648 Botrytis cinerea BC1G_09648 N 0.782
CHGG_09128 Chaetomium globosum CHGG_09128 N 0.846
GLRG_08760 Colletotrichum graminicola GLRG_08760 N 0.817
estExt_Genewise1.C_90037 Cryphonectria parasitica estExt_Genewise1.C_90037 N 0.823
FOXG_05959 Fusarium oxysporum FOXG_05959 N 0.782
FVEG_03827 Fusarium verticillioides FVEG_03827 N 0.782
estExt_Genewise1Plus.C_51423 Myceliophthora thermophila estExt_Genewise1Plus.C_51423 N 0.818
estExt_fgenesh1_pm.C_chr_20271 Mycosphaerella graminicola estExt_fgenesh1_pm.C_chr_20271 N 0.701
e_gw1.18.2147.1 Nectria haematococca e_gw1.18.2147.1 N 0.786
NCU07069 Neurospora crassa NCU07069 N 0.811
estExt_fgenesh3_kg.C_60024 Neurospora discreta estExt_fgenesh3_kg.C_60024 N 0.811
estExt_fgenesh2_kg.C_20245 Neurospora tetrasperma estExt_fgenesh2_kg.C_20245 N 0.811
Pc13g10700 Penicillium chrysogenum Pc13g10700 N 0.740
PTRG_11856 Pyrenophora tritici repentis PTRG_11856 N 0.737
SS1G_14437 Sclerotinia sclerotiorum SS1G_14437 N 0.789
e_gw1.5.1788.1 Thielavia terrestris e_gw1.5.1788.1 N 0.846
fgenesh2_kg.10__63__CBWT_CBYP_CBYT_CCAH_1370_0_CBYT4195.b1 Trichoderma atroviride fgenesh2_kg.10__63__CBWT_CBYP_CBYT_CCAH_1370_0_CBYT4195.b1 N 0.782
estExt_fgenesh5_pg.C_160051 Trichoderma reesei estExt_fgenesh5_pg.C_160051 N 0.759
estExt_Genewise1.C_21744 Trichoderma virens estExt_Genewise1.C_21744 N 0.774
TEQG_05050 Trichophyton equinum TEQG_05050 N 0.712
VDAG_10099 Verticillium dahliae VDAG_10099 N 0.786