PITG_03115 (Phytophthora infestans)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 PITG_03115 T01505_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PITG_03115T0 CCCH ZF 43 69
PITG_03115T0 CCCH ZF 81 107

Links

Other CCCH ZF family RBPs
Other Phytophthora infestans RBPs

13 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh1_pg.C_110230 Phytophthora capsici estExt_fgenesh1_pg.C_110230 N 0.981
s_442346 Phytophthora sojae s_442346 N 0.963
fgenesh1_pg.C_scaffold_30000016 Phytophthora ramorum fgenesh1_pg.C_scaffold_30000016 N 0.963
SPRG_05482 Saprolegnia parasitica SPRG_05482 N 0.870
SPRG_14542 Saprolegnia parasitica SPRG_14542 N 0.870
DDB_G0285973 Dictyostelium discoideum DDB_G0285973 I 0.741
fgeneshCV_pg.C_scaffold_14000116 Chlorella vulgaris fgeneshCV_pg.C_scaffold_14000116 I 0.722
estExt_fgeneshDP_kg.C_230001 Dictyostelium purpureum estExt_fgeneshDP_kg.C_230001 I 0.722
CMA121C Cyanidioschyzon merolae CMA121C N 0.704
EDI_287240 Entamoeba dispar EDI_287240 N 0.704
s_451344 Phytophthora sojae s_451344 N 0.704
EHI_008770 Entamoeba histolytica EHI_008770 N 0.704
gw1.534.24.1 Capitella teleta gw1.534.24.1 I 0.704