Medtr5g021410 (Medicago truncatula)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 Medtr5g021410 T05786_0.6 PlantGDB (2010-Oct-15)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Medtr5g021410.1 CCCH ZF 644 668

Links

Other CCCH ZF family RBPs
Other Medicago truncatula RBPs

9 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
B9NDJ8_POPTR Populus trichocarpa POPTR_0007s13760 N 0.880
28140.m000105 Ricinus communis 28140.m000105 N 0.880
Glyma11g07890.1 Glycine max Glyma11g07890.1 N 0.880
chr2.CM0249.60.nd Lotus japonicus chr2.CM0249.60.nd N 0.880
POPTR_0005s11920 Populus trichocarpa POPTR_0005s11920 N 0.880
cassava18744.valid.m1 Manihot esculenta cassava18744.valid.m1 N 0.846
GSVIVG00018827001 Vitis vinifera GSVIVG00018827001 N 0.800
PK00327.1 Cannabis sativa PK00327.1 N 0.760
PK14581.1 Cannabis sativa PK14581.1 N 0.760