PK14581.1 (Cannabis sativa)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 PK14581.1 T01762_0.6 Cannabis sativa genome (2012-Feb-20)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PK14581.1 CCCH ZF 1640 1664

Links

Other CCCH ZF family RBPs
Other Cannabis sativa RBPs

13 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GSVIVG00018827001 Vitis vinifera GSVIVG00018827001 N 0.920
cassava41851.m1 Manihot esculenta cassava41851.m1 N 0.880
Glyma11g07890.1 Glycine max Glyma11g07890.1 N 0.840
chr2.CM0249.60.nd Lotus japonicus chr2.CM0249.60.nd N 0.840
28140.m000105 Ricinus communis 28140.m000105 N 0.840
PK00327.1 Cannabis sativa PK00327.1 N 0.800
B9NDJ8_POPTR Populus trichocarpa POPTR_0007s13760 N 0.800
POPTR_0005s11920 Populus trichocarpa POPTR_0005s11920 N 0.800
XM_002886185.1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3002861 N 0.769
cassava18744.valid.m1 Manihot esculenta cassava18744.valid.m1 N 0.769
B9H0X1_POPTR Populus trichocarpa POPTR_0004s16880 N 0.769
AT2G16485 Arabidopsis thaliana AT2G16485-TAIR-G N 0.769
Medtr5g021410 Medicago truncatula Medtr5g021410 N 0.760