GSVIVG00018827001 (Vitis vinifera)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 GSVIVG00018827001 T03885_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSVIVT00018827001 CCCH ZF 1338 1362

Links

Other CCCH ZF family RBPs
Other Vitis vinifera RBPs

12 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK14581.1 Cannabis sativa PK14581.1 N 0.920
PK00327.1 Cannabis sativa PK00327.1 N 0.880
chr2.CM0249.60.nd Lotus japonicus chr2.CM0249.60.nd N 0.880
Glyma11g07890.1 Glycine max Glyma11g07890.1 N 0.880
28140.m000105 Ricinus communis 28140.m000105 N 0.880
cassava41851.m1 Manihot esculenta cassava41851.m1 N 0.840
POPTR_0005s11920 Populus trichocarpa POPTR_0005s11920 N 0.840
B9NDJ8_POPTR Populus trichocarpa POPTR_0007s13760 N 0.840
cassava18744.valid.m1 Manihot esculenta cassava18744.valid.m1 N 0.808
Medtr5g021410 Medicago truncatula Medtr5g021410 N 0.800
XM_002886185.1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3002861 N 0.769
AT2G16485 Arabidopsis thaliana AT2G16485-TAIR-G N 0.769