CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PTTG_06885
(
Puccinia triticina
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
PTTG_06885
T08408_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTTG_06885T0
CCHC ZF
125
142
GLCFQCGEKGHILRECPE
Links
Other
CCHC ZF
family RBPs
Other
Puccinia triticina
RBPs
38 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PTTG_04497
Puccinia triticina
PTTG_04497
N
0.889
PTTG_06752
Puccinia triticina
PTTG_06752
N
0.833
PTTG_08665
Puccinia triticina
PTTG_08665
N
0.833
PTTG_05127
Puccinia triticina
PTTG_05127
N
0.778
PTTG_05279
Puccinia triticina
PTTG_05279
N
0.778
PTTG_10004
Puccinia triticina
PTTG_10004
N
0.778
PTTG_04681
Puccinia triticina
PTTG_04681
N
0.778
PTTG_03581
Puccinia triticina
PTTG_03581
N
0.778
PTTG_03611
Puccinia triticina
PTTG_03611
N
0.778
PTTG_09697
Puccinia triticina
PTTG_09697
N
0.778
PTTG_11204
Puccinia triticina
PTTG_11204
N
0.778
PTTG_09362
Puccinia triticina
PTTG_09362
N
0.778
PTTG_08980
Puccinia triticina
PTTG_08980
N
0.778
PTTG_01306
Puccinia triticina
PTTG_01306
N
0.778
PTTG_08372
Puccinia triticina
PTTG_08372
N
0.778
PTTG_08329
Puccinia triticina
PTTG_08329
N
0.778
PTTG_07232
Puccinia triticina
PTTG_07232
N
0.778
PTTG_03874
Puccinia triticina
PTTG_03874
N
0.722
PTTG_06629
Puccinia triticina
PTTG_06629
N
0.722
PTTG_05387
Puccinia triticina
PTTG_05387
N
0.722
PTTG_06000
Puccinia triticina
PTTG_06000
N
0.722
PTTG_05245
Puccinia triticina
PTTG_05245
N
0.722
PTTG_06677
Puccinia triticina
PTTG_06677
N
0.722
PTTG_10688
Puccinia triticina
PTTG_10688
N
0.722
PTTG_09070
Puccinia triticina
PTTG_09070
N
0.722
PTTG_10119
Puccinia triticina
PTTG_10119
N
0.722
PTTG_09062
Puccinia triticina
PTTG_09062
N
0.722
PTTG_08960
Puccinia triticina
PTTG_08960
N
0.722
PTTG_08342
Puccinia triticina
PTTG_08342
N
0.722
PTTG_08777
Puccinia triticina
PTTG_08777
N
0.722
PTTG_10291
Puccinia triticina
PTTG_10291
N
0.722
PTTG_10451
Puccinia triticina
PTTG_10451
N
0.722
PTTG_10798
Puccinia triticina
PTTG_10798
N
0.722
BRADI3G11560
Brachypodium distachyon
BRADI3G11560
N
0.722
PTTG_10706
Puccinia triticina
PTTG_10706
N
0.722
PTTG_07053
Puccinia triticina
PTTG_07053
N
0.722
PTTG_10645
Puccinia triticina
PTTG_10645
N
0.722
PTTG_01003
Puccinia triticina
PTTG_01003
N
0.722