CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PABG_06460
(
Paracoccidioides brasiliensis
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
PABG_06460
T17745_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PABG_06460T0
KH
172
245
DAMKLELSMHTLVCGRTRKNIKLIEAQTNTAIYFPPPFPRVFGYTPPGGNRRSEDEVYITGESQEQIGQAKKKL
PABG_06460T0
KH
352
388
TMLSDICTNSGAEVSFDKLTFTINGSDDSVKAAMMVI
PABG_06460T0
KH
402
431
RVKIELANEHKEFVSGKKNGKINKIMGQSE
PABG_06460T0
KH
467
541
SISFHVPDQYHKRIIGIGGQHIQRIMKKYSVFVKFSNAMDRGGVGKDDDDVKVDNVICRTPARNAQNLELVKQEI
PABG_06460T0
KH
554
612
SETVVINRLYHRELLARMSEIEELEKKWNCKIDFPSTELASDFVTISGPEYQVPQAVDS
Links
Other
KH
family RBPs
Other
Paracoccidioides brasiliensis
RBPs
9 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
HCAG_05999
Histoplasma capsulatum
HCAG_05999
N
0.831
ATEG_01323
Aspergillus terreus
CADATEAG00002653
N
0.795
fgenesh1_pg.00866_#_126
Aspergillus carbonarius
fgenesh1_pg.00866_#_126
N
0.795
UREG_06534
Uncinocarpus reesii
UREG_06534
N
0.791
BDBG_03236
Blastomyces dermatitidis
BDBG_03236
N
0.788
Pc12g11760
Penicillium chrysogenum
Pc12g11760
N
0.765
MCYG_03492
Microsporum canis
MCYG_03492
N
0.760
ACLA_074000
Aspergillus clavatus
CADACLAG00007261
N
0.727
estExt_Genewise1Plus.C_210177
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_210177
N
0.706