CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ACLA_074000
(
Aspergillus clavatus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
CADACLAG00007261
T18181_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADACLAP00007101
KH
278
349
MRLELTMHTLVCGRTRKNIKLIEAATGTAIYFPPPFPRIFGYTPPGARRRSEDEVYITGDTQEQIARAKQKL
CADACLAP00007101
KH
455
491
TMLSDICTNSGAEVSFDNLTFTINGSDDAVKSAMMVV
CADACLAP00007101
KH
505
566
RVKIELANEHKEFVSGKKNGKINKIMGQSNVQIIFDGFNEYNFYIDVCGNQYESTKNGLDLV
CADACLAP00007101
KH
573
643
SISFHVPDQYHKRIIGIGGQHIQRIMKKYSVFVKFSNAMDRGGMGKEDDDIKVDNVICRTPARNAQSLDLV
CADACLAP00007101
KH
678
719
TEIDELEKKWNCKIEFPSTELASDVVTISGPEYQVPQAVDAL
Links
Other
KH
family RBPs
Other
Aspergillus clavatus
RBPs
16 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
fgenesh1_pg.00866_#_126
Aspergillus carbonarius
fgenesh1_pg.00866_#_126
N
0.917
ATEG_01323
Aspergillus terreus
CADATEAG00002653
N
0.911
Pc12g11760
Penicillium chrysogenum
Pc12g11760
N
0.888
BDBG_03236
Blastomyces dermatitidis
BDBG_03236
N
0.879
HCAG_05999
Histoplasma capsulatum
HCAG_05999
N
0.841
TERG_04920
Trichophyton rubrum
TERG_04920
N
0.809
TESG_05929
Trichophyton tonsurans
TESG_05929
N
0.809
UREG_06534
Uncinocarpus reesii
UREG_06534
N
0.801
TEQG_01206
Trichophyton equinum
TEQG_01206
N
0.800
MGYG_03096
Microsporum gypseum
MGYG_03096
N
0.800
MCYG_03492
Microsporum canis
MCYG_03492
N
0.770
estExt_Genewise1Plus.C_210177
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_210177
N
0.765
PABG_06460
Paracoccidioides brasiliensis
PABG_06460
N
0.727
FVEG_06144
Fusarium verticillioides
FVEG_06144
N
0.705
FOXG_08528
Fusarium oxysporum
FOXG_08528
N
0.705
e_gw1.2.59.1
Trichoderma atroviride
e_gw1.2.59.1
N
0.702