CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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UREG_06534
(
Uncinocarpus reesii
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
UREG_06534
T17897_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
URET_06534
KH
484
558
VDVMKLELTMHTLVCGRTRRNIKLIEAATNTAIYFPPPFPRVYGYTPPGAYRRSEDEVYITGTSQDQIAKAKQKL
URET_06534
KH
663
699
TMLSDICANSGADVSFDKLTFTIHGSDDAVKAAMMVI
URET_06534
KH
713
771
RVKLELANEHKEFVSGKKNGKINKIMGQSNVQIIFDGFNEYNFYIDVCATQYEAARNGL
URET_06534
KH
781
853
SISFHVPDQYHKRIIGIGGQHIQRIMKKYSVFVKFSNAMDRGGVSKDDDDIRVENVICRTPARNAQNLELVKQ
URET_06534
KH
868
927
SETVLVNRLYHRELISRMKDIDELEKKWNCKIDFPSTETASDFVTISGPEYQVPQAVDAF
Links
Other
KH
family RBPs
Other
Uncinocarpus reesii
RBPs
18 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
MCYG_03492
Microsporum canis
MCYG_03492
N
0.870
HCAG_05999
Histoplasma capsulatum
HCAG_05999
N
0.853
fgenesh1_pg.00866_#_126
Aspergillus carbonarius
fgenesh1_pg.00866_#_126
N
0.850
ATEG_01323
Aspergillus terreus
CADATEAG00002653
N
0.840
BDBG_03236
Blastomyces dermatitidis
BDBG_03236
N
0.824
Pc12g11760
Penicillium chrysogenum
Pc12g11760
N
0.821
ACLA_074000
Aspergillus clavatus
CADACLAG00007261
N
0.801
TERG_04920
Trichophyton rubrum
TERG_04920
N
0.799
TESG_05929
Trichophyton tonsurans
TESG_05929
N
0.799
TEQG_01206
Trichophyton equinum
TEQG_01206
N
0.796
MGYG_03096
Microsporum gypseum
MGYG_03096
N
0.795
PABG_06460
Paracoccidioides brasiliensis
PABG_06460
N
0.791
estExt_Genewise1Plus.C_210177
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_210177
N
0.773
estExt_Genewise1Plus.C_140444
Mycosphaerella fijiensis
estExt_Genewise1Plus.C_140444
N
0.737
e_gw1.2.59.1
Trichoderma atroviride
e_gw1.2.59.1
N
0.709
FGSG_06181
Fusarium graminearum
FGSG_06181
N
0.703
FOXG_08528
Fusarium oxysporum
FOXG_08528
N
0.702
FVEG_06144
Fusarium verticillioides
FVEG_06144
N
0.702