ENSCSAVG00000008600 (Ciona savignyi)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSCSAVG00000008600 T18599_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCSAVP00000014719 KH 132 181

Links

Other KH family RBPs
Other Ciona savignyi RBPs

26 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgeneshTA2_pg.C_scaffold_1000697 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_1000697 N 0.740
KLLA0C00506g Kluyveromyces lactis KLLA0C00506g N 0.725
e_gw1.35.542.1 Selaginella moellendorfii e_gw1.35.542.1 N 0.712
GSPATP00022892001 Paramecium tetraurelia GSPATP00022892001 N 0.706
estExt_Genewise1Plus.C_20668 Chlorella vulgaris estExt_Genewise1Plus.C_20668 N 0.706
estExt_Genewise1.C_20589 Coccomyxa C 169 estExt_Genewise1.C_20589 N 0.706
Ame_R008803 Ailuropoda melanoleuca Ame_R008803 N 0.706
XM_846783.1 Canis familiaris ENSCAFG00000005665 N 0.706
PGUG_03304 Candida guilliermondii PGUG_03304 N 0.706
AMAG_09721 Allomyces macrogynus AMAG_09721 N 0.706
AMAG_07778 Allomyces macrogynus AMAG_07778 N 0.706
A7TFC5_VANPO Vanderwaltozyma polyspora A7TFC5_VANPO N 0.706
SAKL0C00484g Lachancea kluyveri SAKL0C00484g N 0.706
DEHA0E14685g Debaryomyces hansenii DEHA0E14685g N 0.706
2245_YCL059C Saccharomyces mikatae 2245_YCL059C N 0.706
THAPSDRAFT_268598 Thalassiosira pseudonana Thaps268598 N 0.706
PHATRDRAFT_45441 Phaeodactylum tricornutum Phatr45441 N 0.706
KRR1 Monodelphis domestica ENSMODG00000020451 N 0.706
KRR1 Macropus eugenii ENSMEUG00000011365 N 0.706
KRR1 Saccharomyces cerevisiae YCL059C N 0.706
estExt_fgenesh2_pg.C_210023 Monosiga brevicollis estExt_fgenesh2_pg.C_210023 N 0.706
KRR1 Erinaceus europaeus ENSEEUG00000001466 N 0.706
2217_YCL059C Saccharomyces paradoxus 2217_YCL059C N 0.706
Skud_Contig2065.14 Saccharomyces kudriavzevii Skud_Contig2065.14 N 0.706
estExt_fgenesh3_pg.C_140192 Chlorella NC64A estExt_fgenesh3_pg.C_140192 N 0.706
2380_YCL059C Saccharomyces bayanus 2380_YCL059C N 0.706