estExt_Genewise1Plus.C_20668 (Chlorella vulgaris)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 estExt_Genewise1Plus.C_20668 T21691_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_20668 KH 157 206

Links

Other KH family RBPs
Other Chlorella vulgaris RBPs

156 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_Genewise1.C_20589 Coccomyxa C 169 estExt_Genewise1.C_20589 N 1.000
e_gw1.35.542.1 Selaginella moellendorfii e_gw1.35.542.1 N 0.902
KRR1 Saccharomyces cerevisiae YCL059C N 0.900
PGUG_03304 Candida guilliermondii PGUG_03304 N 0.900
2217_YCL059C Saccharomyces paradoxus 2217_YCL059C N 0.900
Skud_Contig2065.14 Saccharomyces kudriavzevii Skud_Contig2065.14 N 0.900
2245_YCL059C Saccharomyces mikatae 2245_YCL059C N 0.900
DEHA0E14685g Debaryomyces hansenii DEHA0E14685g N 0.900
2380_YCL059C Saccharomyces bayanus 2380_YCL059C N 0.900
SAKL0C00484g Lachancea kluyveri SAKL0C00484g N 0.900
Kwal_13011 Kluyveromyces waltii Kwal_13011 N 0.880
estExt_fgenesh3_pg.C_140192 Chlorella NC64A estExt_fgenesh3_pg.C_140192 N 0.880
LELG_00899 Lodderomyces elongisporus LELG_00899 N 0.860
CLUG_04903 Candida lusitaniae CLUG_04903 N 0.860
CTRG_04103 Candida tropicalis CTRG_04103 N 0.860
KRR1 Candida albicans orf19.661 N 0.860
e_gwh1.2.1.2136.1 Pichia stipitis e_gwh1.2.1.2136.1 N 0.860
KLLA0C00506g Kluyveromyces lactis KLLA0C00506g N 0.860
PMAA_048600 Penicillium marneffei PMAA_048600 N 0.860
A7TFC5_VANPO Vanderwaltozyma polyspora A7TFC5_VANPO N 0.860
Cd36_10710 Candida dubliniensis Cd36_10710 N 0.860
estExt_fgenesh2_pg.C_210023 Monosiga brevicollis estExt_fgenesh2_pg.C_210023 N 0.860
KLTH0F00506g Kluyveromyces thermotolerans KLTH0F00506g N 0.849
KRR1 Gorilla gorilla ENSGGOG00000013596 N 0.840
KRR1 Macropus eugenii ENSMEUG00000011365 N 0.840
KRR1 Homo sapiens ENSG00000111615 N 0.840
KRR1 Felis catus ENSFCAG00000005207 N 0.840
KRR1 Cavia porcellus ENSCPOG00000014353 N 0.840
LOC100407700 Callithrix jacchus ENSCJAG00000001181 N 0.840
KRR1 Dasypus novemcinctus ENSDNOG00000015614 N 0.840
Krr1 Dipodomys ordii ENSDORG00000004614 N 0.840
LOC100050169 Equus caballus ENSECAG00000017498 N 0.840
KRR1 Choloepus hoffmanni ENSCHOG00000009636 N 0.840
KRR1 Sus scrofa ENSSSCG00000000520 N 0.840
KRR1 Spermophilus tridecemlineatus ENSSTOG00000003620 N 0.840
KRR1_BOVIN Bos taurus ENSBTAG00000011591 N 0.840
KRR1 Tupaia belangeri ENSTBEG00000008145 N 0.840
KRR1 Tarsius syrichta ENSTSYG00000009394 N 0.840
pasa_Sanger_mRNA6968 Chlamydomonas reinhardtii pasa_Sanger_mRNA6968 N 0.840
KRR1 Tursiops truncatus ENSTTRG00000001661 N 0.840
KRR1 Sorex araneus ENSSARG00000009967 N 0.840
KRR1 Pteropus vampyrus ENSPVAG00000000529 N 0.840
KRR1 Otolemur garnettii ENSOGAG00000010313 N 0.840
KRR1 Monodelphis domestica ENSMODG00000020451 N 0.840
KRR1 Ochotona princeps ENSOPRG00000011858 N 0.840
ENSPPYG00000004785 Pongo pygmaeus ENSPPYG00000004785 N 0.840
XR_025480.1 Pan troglodytes ENSPTRG00000005238 N 0.840
KRR1 Macaca mulatta ENSMMUG00000009640 N 0.840
KRR1 Oryctolagus cuniculus ENSOCUG00000003925 N 0.840
XP_002489989.1 Pichia pastoris XP_002489989.1 N 0.827
KRR1 Meleagris gallopavo ENSMGAG00000010844 N 0.824
Q5ZKE0_CHICK Gallus gallus ENSGALG00000010227 N 0.824
PHATRDRAFT_45441 Phaeodactylum tricornutum Phatr45441 N 0.824
FGSG_06203 Fusarium graminearum FGSG_06203 N 0.820
KRR1 Loxodonta africana ENSLAFG00000015986 N 0.820
CPAG_00706 Candida parapsilosis CPAG_00706 N 0.820
KRR1 Gasterosteus aculeatus ENSGACG00000019481 N 0.820
estExt_Genewise1.C_250056 Neurospora tetrasperma estExt_Genewise1.C_250056 N 0.820
estExt_fgenesh1_pg.C_70293 Batrachochytrium dendrobatidis estExt_fgenesh1_pg.C_70293 N 0.820
krr1 Xenopus tropicalis ENSXETG00000013312 N 0.820
NCU07041 Neurospora crassa NCU07041 N 0.820
XP_002158002.1 Hydra magnipapillata XP_002158002.1 N 0.820
Hrb2 Rattus norvegicus ENSRNOG00000004035 N 0.820
GLRG_02756 Colletotrichum graminicola GLRG_02756 N 0.820
Krr1 Mus musculus ENSMUSG00000063334 N 0.820
Pa_1_24010 Podospora anserina Pa_1_24010 N 0.820
KRR1 Danio rerio ENSDARG00000011246 N 0.820
ATEG_01441 Aspergillus terreus CADATEAG00000360 N 0.820
PTSG_07198 Salpingoeca rosetta PTSG_07198 N 0.820
Ame_R008803 Ailuropoda melanoleuca Ame_R008803 N 0.820
KRR1 Erinaceus europaeus ENSEEUG00000001466 N 0.820
XM_846783.1 Canis familiaris ENSCAFG00000005665 N 0.820
estExt_Genewise1Plus.C_120457 Neurospora discreta estExt_Genewise1Plus.C_120457 N 0.820
ZYRO0F18458g Zygosaccharomyces rouxii ZYRO0F18458g N 0.804
estExt_fgenesh4_pg.C_90052 Volvox carteri estExt_fgenesh4_pg.C_90052 N 0.804
AMAG_07778 Allomyces macrogynus AMAG_07778 N 0.800
AMAG_09721 Allomyces macrogynus AMAG_09721 N 0.800
PredSwiss_ASS2010_156.1 Pneumocystis carinii PredSwiss_ASS2010_156.1 N 0.800
e_gw1.11.691.1 Mycosphaerella fijiensis e_gw1.11.691.1 N 0.800
KRR1 Takifugu rubripes ENSTRUG00000004380 N 0.800
YALI0F30393g Yarrowia lipolytica YALI0F30393g N 0.800
BDBG_00628 Blastomyces dermatitidis BDBG_00628 N 0.800
estExt_Genewise1.C_80450 Myceliophthora thermophila estExt_Genewise1.C_80450 N 0.800
estExt_fgenesh2_pm.C_40064 Thielavia terrestris estExt_fgenesh2_pm.C_40064 N 0.800
fgenesh1_pm.00866_#_279 Aspergillus carbonarius fgenesh1_pm.00866_#_279 N 0.800
Pc15g00270 Penicillium chrysogenum Pc15g00270 N 0.800
estExt_fgenesh1_pg.C_chr_50346 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_50346 N 0.800
KRR1 Vicugna pacos ENSVPAG00000011750 N 0.800
SPPG_02913 Spizellomyces punctatus SPPG_02913 N 0.800
Aqu1.217752 Amphimedon queenslandica Aqu1.217752 N 0.784
THAPSDRAFT_268598 Thalassiosira pseudonana Thaps268598 N 0.780
gw1.3.2120.1 Cryphonectria parasitica gw1.3.2120.1 N 0.780
GK24616 Drosophila willistoni FBgn0226576 N 0.780
e_gw1.1.604.1 Mucor circinelloides e_gw1.1.604.1 N 0.780
estExt_Genewise1Plus.C_250151 Melampsora laricis populina estExt_Genewise1Plus.C_250151 N 0.780
GJ19628 Drosophila virilis FBgn0206770 N 0.780
MDP0000221204 Malus x domestica MDP0000221204 N 0.780
Medtr5g094630 Medicago truncatula Medtr5g094630 N 0.780
MDP0000130613 Malus x domestica MDP0000130613 N 0.780
GE15854 Drosophila yakuba FBgn0233416 N 0.780
GL18627 Drosophila persimilis FBgn0156228 N 0.780
PK22510.1 Cannabis sativa PK22510.1 N 0.780
UM03241 Ustilago maydis UM03241 N 0.780
GA18062-RA Drosophila pseudoobscura FBgn0078070 N 0.780
dbe Drosophila melanogaster FBgn0020305 N 0.780
GI18007 Drosophila mojavensis FBgn0140747 N 0.780
GG24622 Drosophila erecta FBgn0116754 N 0.780
PASA_GEN_0400107 Daphnia pulex PASA_GEN_0400107 N 0.772
e_gw1.7.987.1 Fragilariopsis cylindrus e_gw1.7.987.1 N 0.765
KRR1 Microcebus murinus ENSMICG00000015127 N 0.760
ENSETEG00000001656 Echinops telfairi ENSETEG00000001656 N 0.760
KRR1 Procavia capensis ENSPCAG00000010269 N 0.760
e_gwh2.2.654.1 Phanerochaete chrysosporium e_gwh2.2.654.1 N 0.760
AGAP007912 Anopheles gambiae AGAP007912 N 0.760
e_gw1.7.291.1 Tremella mesenterica e_gw1.7.291.1 N 0.760
EDP43963.1 Malassezia globosa EDP43963.1 N 0.760
GSPATP00022892001 Paramecium tetraurelia GSPATP00022892001 N 0.760
RO3G_15602 Rhizopus oryzae RO3G_15602 N 0.760
CC1G_09940 Coprinopsis cinerea CC1G_09940 N 0.760
mis3 Schizosaccharomyces pombe SPBC25B2.05 N 0.760
e_gw1.10.100.1 Phycomyces blakesleeanus e_gw1.10.100.1 N 0.760
CMU_000450 Cryptosporidium muris CMU_000450 N 0.760
XP_001186312.1 Strongylocentrotus purpuratus XP_001186312.1 N 0.745
XP_786725.1 Strongylocentrotus purpuratus XP_786725.1 N 0.745
eu2.Lbscf0025g00750 Laccaria bicolor eu2.Lbscf0025g00750 N 0.740
fgenesh_newKGs_kg.437__12__2686076:1 Emiliania huxleyi fgenesh_newKGs_kg.437__12__2686076:1 N 0.740
CMR456C Cyanidioschyzon merolae CMR456C N 0.740
CNBG_5932 Cryptococcus neoformans CNBG_5932 N 0.740
estExt_fgenesh2_kg.C_20554 Agaricus bisporus estExt_fgenesh2_kg.C_20554 N 0.740
e_gw1.7.303.1 Ostreococcus RCC809 e_gw1.7.303.1 N 0.740
e_gw1.07.00.268.1 Ostreococcus tauri e_gw1.07.00.268.1 N 0.740
XP_002154857.1 Hydra magnipapillata XP_002154857.1 N 0.740
FVEG_06170 Fusarium verticillioides FVEG_06170 N 0.722
Chro.30334 Cryptosporidium hominis Chro.30334 N 0.720
fgenesh1_pm.C_scaffold_4000135 Pleurotus ostreatus fgenesh1_pm.C_scaffold_4000135 N 0.720
cgd3_2950 Cryptosporidium parvum cgd3_2950 N 0.720
fgenesh2_kg.4_#_366_#_2882_1_CFPN Serpula lacrymans fgenesh2_kg.4_#_366_#_2882_1_CFPN N 0.720
Genemark.4150_g Heterobasidion annosum Genemark.4150_g N 0.720
NCLIV_025560 Neospora caninum NCLIV_025560 N 0.720
eugene.0700010461 Ostreococcus lucimarinus eugene.0700010461 N 0.720
estExt_fgenesh3_pm.C_180006 Postia placenta estExt_fgenesh3_pm.C_180006 N 0.720
KRR1 Myotis lucifugus ENSMLUG00000002339 N 0.720
TGME49_062070 Toxoplasma gondii TGME49_062070 N 0.720
TGVEG_072780 Toxoplasma gondii TGVEG_072780 N 0.720
TGGT1_008040 Toxoplasma gondii TGGT1_008040 N 0.720
e_gw1.1.3483.1 Schizophyllum commune e_gw1.1.3483.1 N 0.720
AAH72210 Xenopus laevis AAH72210 N 0.719
ANIA_05875 Aspergillus nidulans CADANIAG00007161 N 0.719
KRR1 Oryzias latipes ENSORLG00000019616 N 0.714
SJAG_00657 Schizosaccharomyces japonicus SJAG_00657 N 0.709
GSTUMT00008009001 Tuber melanosporum GSTUMT00008009001 N 0.707
AAH41273 Xenopus laevis AAH41273 N 0.707
ENSCSAVG00000008600 Ciona savignyi ENSCSAVG00000008600 N 0.706
An02g03350 Aspergillus niger CADANGAG00001848 N 0.702
3707.m00252 Tetrahymena thermophila 3707.m00252 N 0.700
AMSG_07403 Thecamonas trahens AMSG_07403 N 0.700