PHATRDRAFT_45441 (Phaeodactylum tricornutum)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 Phatr45441 T20168_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Phatr45441 KH 155 205

Links

Other KH family RBPs
Other Phaeodactylum tricornutum RBPs

132 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw1.7.987.1 Fragilariopsis cylindrus e_gw1.7.987.1 N 0.843
pasa_Sanger_mRNA6968 Chlamydomonas reinhardtii pasa_Sanger_mRNA6968 N 0.824
estExt_Genewise1.C_20589 Coccomyxa C 169 estExt_Genewise1.C_20589 N 0.824
estExt_fgenesh3_pg.C_140192 Chlorella NC64A estExt_fgenesh3_pg.C_140192 N 0.824
estExt_Genewise1Plus.C_20668 Chlorella vulgaris estExt_Genewise1Plus.C_20668 N 0.824
A7TFC5_VANPO Vanderwaltozyma polyspora A7TFC5_VANPO N 0.804
2380_YCL059C Saccharomyces bayanus 2380_YCL059C N 0.804
estExt_fgenesh2_pg.C_210023 Monosiga brevicollis estExt_fgenesh2_pg.C_210023 N 0.804
Medtr5g094630 Medicago truncatula Medtr5g094630 N 0.804
Skud_Contig2065.14 Saccharomyces kudriavzevii Skud_Contig2065.14 N 0.804
2217_YCL059C Saccharomyces paradoxus 2217_YCL059C N 0.804
2245_YCL059C Saccharomyces mikatae 2245_YCL059C N 0.804
KLLA0C00506g Kluyveromyces lactis KLLA0C00506g N 0.804
KRR1 Saccharomyces cerevisiae YCL059C N 0.804
PGUG_03304 Candida guilliermondii PGUG_03304 N 0.804
DEHA0E14685g Debaryomyces hansenii DEHA0E14685g N 0.804
SAKL0C00484g Lachancea kluyveri SAKL0C00484g N 0.804
ATEG_01441 Aspergillus terreus CADATEAG00000360 N 0.804
e_gw1.35.542.1 Selaginella moellendorfii e_gw1.35.542.1 N 0.788
estExt_fgenesh4_pg.C_90052 Volvox carteri estExt_fgenesh4_pg.C_90052 N 0.788
FGSG_06203 Fusarium graminearum FGSG_06203 N 0.784
PredSwiss_ASS2010_156.1 Pneumocystis carinii PredSwiss_ASS2010_156.1 N 0.784
BDBG_00628 Blastomyces dermatitidis BDBG_00628 N 0.784
MDP0000221204 Malus x domestica MDP0000221204 N 0.784
MDP0000130613 Malus x domestica MDP0000130613 N 0.784
AMAG_07778 Allomyces macrogynus AMAG_07778 N 0.784
AMAG_09721 Allomyces macrogynus AMAG_09721 N 0.784
Kwal_13011 Kluyveromyces waltii Kwal_13011 N 0.784
CLUG_04903 Candida lusitaniae CLUG_04903 N 0.784
PMAA_048600 Penicillium marneffei PMAA_048600 N 0.784
estExt_fgenesh1_pg.C_chr_50346 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_50346 N 0.784
e_gw1.11.691.1 Mycosphaerella fijiensis e_gw1.11.691.1 N 0.784
THAPSDRAFT_268598 Thalassiosira pseudonana Thaps268598 N 0.784
XP_002489989.1 Pichia pastoris XP_002489989.1 N 0.774
Cd36_10710 Candida dubliniensis Cd36_10710 N 0.765
e_gw1.10.100.1 Phycomyces blakesleeanus e_gw1.10.100.1 N 0.765
CTRG_04103 Candida tropicalis CTRG_04103 N 0.765
PK22510.1 Cannabis sativa PK22510.1 N 0.765
e_gw1.07.00.268.1 Ostreococcus tauri e_gw1.07.00.268.1 N 0.765
e_gwh2.2.654.1 Phanerochaete chrysosporium e_gwh2.2.654.1 N 0.765
fgenesh1_pm.00866_#_279 Aspergillus carbonarius fgenesh1_pm.00866_#_279 N 0.765
e_gwh1.2.1.2136.1 Pichia stipitis e_gwh1.2.1.2136.1 N 0.765
LELG_00899 Lodderomyces elongisporus LELG_00899 N 0.765
KRR1 Candida albicans orf19.661 N 0.765
estExt_Genewise1Plus.C_250151 Melampsora laricis populina estExt_Genewise1Plus.C_250151 N 0.765
e_gw1.7.303.1 Ostreococcus RCC809 e_gw1.7.303.1 N 0.765
GLRG_02756 Colletotrichum graminicola GLRG_02756 N 0.765
KLTH0F00506g Kluyveromyces thermotolerans KLTH0F00506g N 0.759
ZYRO0F18458g Zygosaccharomyces rouxii ZYRO0F18458g N 0.750
XM_846783.1 Canis familiaris ENSCAFG00000005665 N 0.745
KRR1_BOVIN Bos taurus ENSBTAG00000011591 N 0.745
PTSG_07198 Salpingoeca rosetta PTSG_07198 N 0.745
KRR1 Takifugu rubripes ENSTRUG00000004380 N 0.745
KRR1 Tupaia belangeri ENSTBEG00000008145 N 0.745
KRR1 Choloepus hoffmanni ENSCHOG00000009636 N 0.745
KRR1 Spermophilus tridecemlineatus ENSSTOG00000003620 N 0.745
Krr1 Dipodomys ordii ENSDORG00000004614 N 0.745
KRR1 Oryctolagus cuniculus ENSOCUG00000003925 N 0.745
KRR1 Monodelphis domestica ENSMODG00000020451 N 0.745
KRR1 Macaca mulatta ENSMMUG00000009640 N 0.745
KRR1 Otolemur garnettii ENSOGAG00000010313 N 0.745
KRR1 Ochotona princeps ENSOPRG00000011858 N 0.745
KRR1 Pteropus vampyrus ENSPVAG00000000529 N 0.745
XR_025480.1 Pan troglodytes ENSPTRG00000005238 N 0.745
ENSPPYG00000004785 Pongo pygmaeus ENSPPYG00000004785 N 0.745
KRR1 Macropus eugenii ENSMEUG00000011365 N 0.745
KRR1 Gorilla gorilla ENSGGOG00000013596 N 0.745
KRR1 Dasypus novemcinctus ENSDNOG00000015614 N 0.745
KRR1 Sus scrofa ENSSSCG00000000520 N 0.745
KRR1 Cavia porcellus ENSCPOG00000014353 N 0.745
CPAG_00706 Candida parapsilosis CPAG_00706 N 0.745
LOC100050169 Equus caballus ENSECAG00000017498 N 0.745
KRR1 Homo sapiens ENSG00000111615 N 0.745
KRR1 Felis catus ENSFCAG00000005207 N 0.745
KRR1 Erinaceus europaeus ENSEEUG00000001466 N 0.745
LOC100407700 Callithrix jacchus ENSCJAG00000001181 N 0.745
KRR1 Tarsius syrichta ENSTSYG00000009394 N 0.745
e_gw1.1.604.1 Mucor circinelloides e_gw1.1.604.1 N 0.745
estExt_fgenesh2_pm.C_40064 Thielavia terrestris estExt_fgenesh2_pm.C_40064 N 0.745
Pa_1_24010 Podospora anserina Pa_1_24010 N 0.745
EDO06615.1 Babesia bovis EDO06615.1 N 0.745
gw1.3.2120.1 Cryphonectria parasitica gw1.3.2120.1 N 0.745
estExt_fgenesh1_pg.C_70293 Batrachochytrium dendrobatidis estExt_fgenesh1_pg.C_70293 N 0.745
EDP43963.1 Malassezia globosa EDP43963.1 N 0.745
e_gw1.7.291.1 Tremella mesenterica e_gw1.7.291.1 N 0.745
Ame_R008803 Ailuropoda melanoleuca Ame_R008803 N 0.745
CNBG_5932 Cryptococcus neoformans CNBG_5932 N 0.745
estExt_Genewise1.C_250056 Neurospora tetrasperma estExt_Genewise1.C_250056 N 0.745
Pc15g00270 Penicillium chrysogenum Pc15g00270 N 0.745
YALI0F30393g Yarrowia lipolytica YALI0F30393g N 0.745
NCU07041 Neurospora crassa NCU07041 N 0.745
eugene.0700010461 Ostreococcus lucimarinus eugene.0700010461 N 0.745
KRR1 Tursiops truncatus ENSTTRG00000001661 N 0.745
XP_002158002.1 Hydra magnipapillata XP_002158002.1 N 0.745
estExt_Genewise1.C_80450 Myceliophthora thermophila estExt_Genewise1.C_80450 N 0.745
KRR1 Sorex araneus ENSSARG00000009967 N 0.745
estExt_Genewise1Plus.C_120457 Neurospora discreta estExt_Genewise1Plus.C_120457 N 0.745
Q5ZKE0_CHICK Gallus gallus ENSGALG00000010227 N 0.731
KRR1 Meleagris gallopavo ENSMGAG00000010844 N 0.731
Hrb2 Rattus norvegicus ENSRNOG00000004035 N 0.725
estExt_fgenesh3_pm.C_180006 Postia placenta estExt_fgenesh3_pm.C_180006 N 0.725
KRR1 Gasterosteus aculeatus ENSGACG00000019481 N 0.725
Krr1 Mus musculus ENSMUSG00000063334 N 0.725
KRR1 Loxodonta africana ENSLAFG00000015986 N 0.725
eu2.Lbscf0025g00750 Laccaria bicolor eu2.Lbscf0025g00750 N 0.725
KRR1 Danio rerio ENSDARG00000011246 N 0.725
SPPG_02913 Spizellomyces punctatus SPPG_02913 N 0.725
mis3 Schizosaccharomyces pombe SPBC25B2.05 N 0.725
RO3G_15602 Rhizopus oryzae RO3G_15602 N 0.725
krr1 Xenopus tropicalis ENSXETG00000013312 N 0.725
CC1G_09940 Coprinopsis cinerea CC1G_09940 N 0.725
estExt_fgenesh2_kg.C_20554 Agaricus bisporus estExt_fgenesh2_kg.C_20554 N 0.725
e_gw1.1.3483.1 Schizophyllum commune e_gw1.1.3483.1 N 0.725
fgenesh1_pm.C_scaffold_4000135 Pleurotus ostreatus fgenesh1_pm.C_scaffold_4000135 N 0.725
fgenesh2_kg.4_#_366_#_2882_1_CFPN Serpula lacrymans fgenesh2_kg.4_#_366_#_2882_1_CFPN N 0.725
Genemark.4150_g Heterobasidion annosum Genemark.4150_g N 0.725
GSPATP00022892001 Paramecium tetraurelia GSPATP00022892001 N 0.725
GSTUMT00008009001 Tuber melanosporum GSTUMT00008009001 N 0.712
Aqu1.217752 Amphimedon queenslandica Aqu1.217752 N 0.712
FVEG_06170 Fusarium verticillioides FVEG_06170 N 0.709
ANIA_05875 Aspergillus nidulans CADANIAG00007161 N 0.707
KRR1 Vicugna pacos ENSVPAG00000011750 N 0.706
Chro.30334 Cryptosporidium hominis Chro.30334 N 0.706
TGME49_062070 Toxoplasma gondii TGME49_062070 N 0.706
TGVEG_072780 Toxoplasma gondii TGVEG_072780 N 0.706
fgenesh_newKGs_kg.437__12__2686076:1 Emiliania huxleyi fgenesh_newKGs_kg.437__12__2686076:1 N 0.706
TGGT1_008040 Toxoplasma gondii TGGT1_008040 N 0.706
NCLIV_025560 Neospora caninum NCLIV_025560 N 0.706
UM03241 Ustilago maydis UM03241 N 0.706
cgd3_2950 Cryptosporidium parvum cgd3_2950 N 0.706
CMU_000450 Cryptosporidium muris CMU_000450 N 0.706
ENSCSAVG00000008600 Ciona savignyi ENSCSAVG00000008600 N 0.706