CABZ01043311.1 (Danio rerio)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSDARG00000078462 T18640_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
FXR2
M020_0.6 		Homo sapiens DGACRRR RNAcompete
Ray et al.(2013)
RNCMPT00020 		0.779
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000092273 KH 203 262
ENSDARP00000092273 KH 266 350

Links

Other KH family RBPs
Other Danio rerio RBPs

49 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fxr2 Danio rerio ENSDARG00000016260 I 1.000
FXR2 Oryzias latipes ENSORLG00000011571 I 0.897
FXR2 Gasterosteus aculeatus ENSGACG00000019983 I 0.883
FXR2 Takifugu rubripes ENSTRUG00000010696 I 0.855
FXR2 Tetraodon nigroviridis ENSTNIG00000005118 I 0.793
FXR2 Sus scrofa ENSSSCG00000017953 I 0.779
FXR2 Pteropus vampyrus ENSPVAG00000016306 I 0.779
FXR2 Pan troglodytes ENSPTRG00000008698 I 0.779
ENSPPYG00000007930 Pongo pygmaeus ENSPPYG00000007930 I 0.779
FXR2 Spermophilus tridecemlineatus ENSSTOG00000005657 I 0.779
FXR2 Tupaia belangeri ENSTBEG00000002514 I 0.779
FXR2 Tursiops truncatus ENSTTRG00000010231 I 0.779
FXR2 Cavia porcellus ENSCPOG00000023303 I 0.779
FXR2 Bos taurus ENSBTAG00000005462 I 0.779
FXR2 Callithrix jacchus ENSCJAG00000015063 I 0.779
FXR2 Vicugna pacos ENSVPAG00000000147 I 0.779
Fxr2 Rattus norvegicus ENSRNOG00000011876 I 0.779
LOC100147323 Equus caballus ENSECAG00000007051 I 0.779
FXR2 Erinaceus europaeus ENSEEUG00000013410 I 0.779
FXR2 Homo sapiens ENSG00000129245 D 0.779
FXR2 Felis catus ENSFCAG00000009620 I 0.779
FXR2 Macaca mulatta ENSMMUG00000013510 I 0.779
FXR2 Microcebus murinus ENSMICG00000014799 I 0.779
FXR2 Monodelphis domestica ENSMODG00000007179 I 0.779
FXR2 Oryctolagus cuniculus ENSOCUG00000010393 I 0.779
Fxr2 Mus musculus ENSMUSG00000018765 I 0.779
FXR2 Canis familiaris ENSCAFG00000016685 I 0.772
FXR2 Ochotona princeps ENSOPRG00000017108 I 0.772
Ame_R012967 Ailuropoda melanoleuca Ame_R012967 I 0.772
FXR2 Echinops telfairi ENSETEG00000018613 I 0.772
FXR2 Loxodonta africana ENSLAFG00000001114 I 0.772
FXR2 Procavia capensis ENSPCAG00000013184 I 0.772
FXR2 Anolis carolinensis ENSACAG00000000561 I 0.772
FXR2 Myotis lucifugus ENSMLUG00000003438 I 0.766
FXR2 Dasypus novemcinctus ENSDNOG00000001047 I 0.766
fxr1 Danio rerio ENSDARG00000022968 I 0.752
FXR1 Gasterosteus aculeatus ENSGACG00000006052 I 0.724
FXR1 Tetraodon nigroviridis ENSTNIG00000003790 I 0.724
FXR1 Oryzias latipes ENSORLG00000011787 I 0.724
FXR1 Takifugu rubripes ENSTRUG00000003486 I 0.724
Q5F3S6_CHICK Gallus gallus ENSGALG00000008864 I 0.703
FXR1 Meleagris gallopavo ENSMGAG00000009602 I 0.703
AAH43638 Xenopus laevis AAH43638 I 0.703
AAH73457 Xenopus laevis AAH73457 I 0.703
AAY79165 Xenopus laevis AAY79165 I 0.703
AAY79166 Xenopus laevis AAY79166 I 0.703
P51115 Xenopus laevis P51115 I 0.703
Q7ZTQ5 Xenopus laevis Q7ZTQ5 I 0.703
AAI31885 Xenopus laevis AAI31885 I 0.703