FXR2 (Tetraodon nigroviridis)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSTNIG00000005118 T19602_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
FXR2
M020_0.6 		Homo sapiens DGACRRR RNAcompete
Ray et al.(2013)
RNCMPT00020 		0.838
FXR1
M152_0.6 		Homo sapiens AYGACR RNAcompete
Ray et al.(2013)
RNCMPT00161 		0.746
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000007786 KH 220 279
ENSTNIP00000007786 KH 283 351

Links

Other KH family RBPs
Other Tetraodon nigroviridis RBPs

91 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
FXR2 Takifugu rubripes ENSTRUG00000010696 I 0.992
FXR2 Oryzias latipes ENSORLG00000011571 I 0.930
FXR2 Spermophilus tridecemlineatus ENSSTOG00000005657 I 0.838
FXR2 Sus scrofa ENSSSCG00000017953 I 0.838
FXR2 Felis catus ENSFCAG00000009620 I 0.838
FXR2 Callithrix jacchus ENSCJAG00000015063 I 0.838
FXR2 Erinaceus europaeus ENSEEUG00000013410 I 0.838
FXR2 Homo sapiens ENSG00000129245 D 0.838
Fxr2 Rattus norvegicus ENSRNOG00000011876 I 0.838
FXR2 Cavia porcellus ENSCPOG00000023303 I 0.838
FXR2 Bos taurus ENSBTAG00000005462 I 0.838
FXR2 Pteropus vampyrus ENSPVAG00000016306 I 0.838
FXR2 Pan troglodytes ENSPTRG00000008698 I 0.838
LOC100147323 Equus caballus ENSECAG00000007051 I 0.838
FXR2 Tupaia belangeri ENSTBEG00000002514 I 0.838
Fxr2 Mus musculus ENSMUSG00000018765 I 0.838
FXR2 Vicugna pacos ENSVPAG00000000147 I 0.838
ENSPPYG00000007930 Pongo pygmaeus ENSPPYG00000007930 I 0.838
FXR2 Tursiops truncatus ENSTTRG00000010231 I 0.838
FXR2 Monodelphis domestica ENSMODG00000007179 I 0.838
FXR2 Oryctolagus cuniculus ENSOCUG00000010393 I 0.838
FXR2 Microcebus murinus ENSMICG00000014799 I 0.838
FXR2 Macaca mulatta ENSMMUG00000013510 I 0.838
FXR2 Procavia capensis ENSPCAG00000013184 I 0.831
FXR2 Echinops telfairi ENSETEG00000018613 I 0.831
FXR2 Ochotona princeps ENSOPRG00000017108 I 0.831
Ame_R012967 Ailuropoda melanoleuca Ame_R012967 I 0.831
FXR2 Canis familiaris ENSCAFG00000016685 I 0.831
FXR2 Loxodonta africana ENSLAFG00000001114 I 0.831
FXR2 Dasypus novemcinctus ENSDNOG00000001047 I 0.823
FXR2 Myotis lucifugus ENSMLUG00000003438 I 0.823
FXR2 Anolis carolinensis ENSACAG00000000561 I 0.815
FXR2 Gasterosteus aculeatus ENSGACG00000019983 I 0.814
fxr1 Danio rerio ENSDARG00000022968 I 0.800
CABZ01043311.1 Danio rerio ENSDARG00000078462 I 0.793
fxr2 Danio rerio ENSDARG00000016260 I 0.793
AAI31885 Xenopus laevis AAI31885 I 0.769
FXR1 Gasterosteus aculeatus ENSGACG00000006052 I 0.769
AAY79165 Xenopus laevis AAY79165 I 0.769
P51115 Xenopus laevis P51115 I 0.769
Q5F3S6_CHICK Gallus gallus ENSGALG00000008864 I 0.769
AAH73457 Xenopus laevis AAH73457 I 0.769
FXR1 Tetraodon nigroviridis ENSTNIG00000003790 I 0.769
AAH43638 Xenopus laevis AAH43638 I 0.769
FXR1 Meleagris gallopavo ENSMGAG00000009602 I 0.769
Q7ZTQ5 Xenopus laevis Q7ZTQ5 I 0.769
AAY79166 Xenopus laevis AAY79166 I 0.769
FXR1 Takifugu rubripes ENSTRUG00000003486 I 0.769
FXR1 Anolis carolinensis ENSACAG00000003918 I 0.762
FXR1 Taeniopygia guttata ENSTGUG00000010560 I 0.762
FXR1 Oryzias latipes ENSORLG00000011787 I 0.762
fxr1 Xenopus tropicalis ENSXETG00000019441 I 0.762
AAC59682 Xenopus laevis AAC59682 I 0.762
Fxr1 Mus musculus ENSMUSG00000027680 I 0.754
FXR1 Tursiops truncatus ENSTTRG00000014698 I 0.746
FXR1 Tarsius syrichta ENSTSYG00000001610 I 0.746
Ame_R018977 Ailuropoda melanoleuca Ame_R018977 I 0.746
ENSPPYG00000014327 Pongo pygmaeus ENSPPYG00000014327 I 0.746
FXR1 Macaca mulatta ENSMMUG00000012105 I 0.746
FXR1 Oryctolagus cuniculus ENSOCUG00000023518 I 0.746
FXR1 Ornithorhynchus anatinus ENSOANG00000011045 I 0.746
FXR1 Monodelphis domestica ENSMODG00000021294 I 0.746
FXR1 Vicugna pacos ENSVPAG00000003384 I 0.746
FXR1 Gorilla gorilla ENSGGOG00000009957 I 0.746
FXR1 Pan troglodytes ENSPTRG00000015656 I 0.746
FXR1_BOVIN Bos taurus ENSBTAG00000016457 I 0.746
FXR1 Canis familiaris ENSCAFG00000011582 I 0.746
FXR1 Pteropus vampyrus ENSPVAG00000002823 I 0.746
FXR1 Callithrix jacchus ENSCJAG00000012802 I 0.746
FXR1 Myotis lucifugus ENSMLUG00000006840 I 0.746
FXR1 Equus caballus ENSECAG00000007560 I 0.746
FXR1 Loxodonta africana ENSLAFG00000001908 I 0.746
FXR1 Cavia porcellus ENSCPOG00000010418 I 0.746
FXR1 Homo sapiens ENSG00000114416 D 0.746
FXR1 Echinops telfairi ENSETEG00000006891 I 0.746
FXR1 Sus scrofa ENSSSCG00000011769 I 0.738
fmr1 Xenopus tropicalis ENSXETG00000019647 I 0.736
FXR1 Erinaceus europaeus ENSEEUG00000006823 I 0.731
AAI12953 Xenopus laevis AAI12953 I 0.729
AAI70204 Xenopus laevis AAI70204 I 0.729
P51113 Xenopus laevis P51113 I 0.729
AAC59683 Xenopus laevis AAC59683 I 0.729
Q2KHP9 Xenopus laevis Q2KHP9 I 0.729
FMR1 Oryzias latipes ENSORLG00000009094 I 0.725
FXR1 Ochotona princeps ENSOPRG00000009223 I 0.723
Q5ZHM3_CHICK Gallus gallus ENSGALG00000009177 I 0.723
FMR1 Canis familiaris ENSCAFG00000019085 I 0.721
nasonia_NCBI_hmm462784 Nasonia vitripennis nasonia_NCBI_hmm462784 I 0.718
amel4_ncbi_hmm37854 Apis mellifera amel4_ncbi_hmm37854 I 0.718
fmr1 Danio rerio ENSDARG00000037433 I 0.710
AAEL009326 Aedes aegypti AAEL009326 I 0.702