CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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LARP4
(
Oryzias latipes
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
ENSORLG00000018835
T22825_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000023519
La
106
163
LKCRLESCFSRENLSKDLYLISQMDSDQFVSIWTVACMEDIKALTSDTDLILDVLKAS
Links
Other
La
family RBPs
Other
Oryzias latipes
RBPs
44 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LARP4
Tetraodon nigroviridis
ENSTNIG00000014571
N
0.845
LARP4
Takifugu rubripes
ENSTRUG00000007206
N
0.828
LARP4
Gasterosteus aculeatus
ENSGACG00000000680
N
0.828
LARP4
Ornithorhynchus anatinus
ENSOANG00000004373
N
0.810
Larp4
Mus musculus
ENSMUSG00000023025
N
0.793
ENSOCUG00000021417
Oryctolagus cuniculus
ENSOCUG00000021417
N
0.793
LOC683071
Rattus norvegicus
ENSRNOG00000042017
N
0.793
ENSCPOG00000020519
Cavia porcellus
ENSCPOG00000020519
N
0.793
larp4a
Danio rerio
ENSDARG00000078401
N
0.793
LARP4
Danio rerio
ENSDARG00000074979
N
0.793
ENSOCUG00000026872
Oryctolagus cuniculus
ENSOCUG00000026872
N
0.793
A7MB26_BOVIN
Bos taurus
ENSBTAG00000017164
N
0.793
LARP4
Loxodonta africana
ENSLAFG00000005160
N
0.776
LARP4
Tupaia belangeri
ENSTBEG00000005167
N
0.776
LARP4
Tarsius syrichta
ENSTSYG00000004342
N
0.776
LARP4
Gorilla gorilla
ENSGGOG00000015230
N
0.776
LARP4
Equus caballus
ENSECAG00000012479
N
0.776
ENSPPYG00000004512
Pongo pygmaeus
ENSPPYG00000004512
N
0.776
LARP4
Homo sapiens
ENSG00000161813
N
0.776
LARP4
Callithrix jacchus
ENSCJAG00000021131
N
0.776
LARP4
Canis familiaris
ENSCAFG00000008174
N
0.776
Ame_R010643
Ailuropoda melanoleuca
Ame_R010643
N
0.776
LARP4
Takifugu rubripes
ENSTRUG00000015939
N
0.776
LARP4
Tursiops truncatus
ENSTTRG00000003764
N
0.776
XR_019868.1
Pan troglodytes
ENSPTRG00000004935
N
0.776
LOC693337
Macaca mulatta
ENSMMUG00000008172
N
0.776
LARP4
Pteropus vampyrus
ENSPVAG00000016840
N
0.776
Q5F449_CHICK
Gallus gallus
ENSGALG00000006163
N
0.759
LARP4
Monodelphis domestica
ENSMODG00000004844
N
0.759
LARP4
Meleagris gallopavo
ENSMGAG00000010598
N
0.759
LARP4
Oryzias latipes
ENSORLG00000006758
N
0.759
LARP4
Ochotona princeps
ENSOPRG00000004592
N
0.759
LARP4
Procavia capensis
ENSPCAG00000003671
N
0.759
LARP4
Sorex araneus
ENSSARG00000012469
N
0.759
LARP4
Dasypus novemcinctus
ENSDNOG00000018540
N
0.759
LARP4
Gasterosteus aculeatus
ENSGACG00000008381
N
0.759
LARP4
Choloepus hoffmanni
ENSCHOG00000010490
N
0.741
LARP4
Tetraodon nigroviridis
ENSTNIG00000015109
N
0.741
LARP4
Taeniopygia guttata
ENSTGUG00000003479
N
0.741
larp4
Xenopus tropicalis
ENSXETG00000007283
N
0.741
AAI24888
Xenopus laevis
AAI24888
N
0.741
LARP4
Myotis lucifugus
ENSMLUG00000012513
N
0.741
AAI30197
Xenopus laevis
AAI30197
N
0.724
LARP4
Anolis carolinensis
ENSACAG00000017133
N
0.707