CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AAI30197
(
Xenopus laevis
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
AAI30197
T23224_0.6
Xenbase (2010-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAI30197
La
127
184
LKKQLEFCFSRENLSKDLYLMSQMDSDQFVPVWTIANMEGIKKLTTDMDLILEVLRST
Links
Other
La
family RBPs
Other
Xenopus laevis
RBPs
74 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
larp4
Xenopus tropicalis
ENSXETG00000007283
N
0.983
AAI24888
Xenopus laevis
AAI24888
N
0.983
LARP4
Taeniopygia guttata
ENSTGUG00000003479
N
0.948
Q5F449_CHICK
Gallus gallus
ENSGALG00000006163
N
0.931
LARP4
Meleagris gallopavo
ENSMGAG00000010598
N
0.931
LARP4
Anolis carolinensis
ENSACAG00000017133
N
0.914
LOC683071
Rattus norvegicus
ENSRNOG00000042017
N
0.897
LARP4
Monodelphis domestica
ENSMODG00000004844
N
0.897
A7MB26_BOVIN
Bos taurus
ENSBTAG00000017164
N
0.897
ENSCPOG00000020519
Cavia porcellus
ENSCPOG00000020519
N
0.897
ENSPPYG00000004512
Pongo pygmaeus
ENSPPYG00000004512
N
0.879
Larp4
Mus musculus
ENSMUSG00000023025
N
0.879
LARP4
Loxodonta africana
ENSLAFG00000005160
N
0.879
LOC693337
Macaca mulatta
ENSMMUG00000008172
N
0.879
LARP4
Tupaia belangeri
ENSTBEG00000005167
N
0.879
LARP4
Tursiops truncatus
ENSTTRG00000003764
N
0.879
Ame_R010643
Ailuropoda melanoleuca
Ame_R010643
N
0.879
LARP4
Tarsius syrichta
ENSTSYG00000004342
N
0.879
LARP4
Takifugu rubripes
ENSTRUG00000015939
N
0.879
LARP4
Pteropus vampyrus
ENSPVAG00000016840
N
0.879
LARP4
Gorilla gorilla
ENSGGOG00000015230
N
0.879
XR_019868.1
Pan troglodytes
ENSPTRG00000004935
N
0.879
LARP4
Ornithorhynchus anatinus
ENSOANG00000004373
N
0.879
LARP4
Homo sapiens
ENSG00000161813
N
0.879
LARP4
Callithrix jacchus
ENSCJAG00000021131
N
0.879
larp4a
Danio rerio
ENSDARG00000078401
N
0.879
LARP4
Gasterosteus aculeatus
ENSGACG00000008381
N
0.879
LARP4
Equus caballus
ENSECAG00000012479
N
0.879
LARP4
Canis familiaris
ENSCAFG00000008174
N
0.879
LARP4
Ochotona princeps
ENSOPRG00000004592
N
0.862
ENSOCUG00000026872
Oryctolagus cuniculus
ENSOCUG00000026872
N
0.862
LARP4
Oryzias latipes
ENSORLG00000006758
N
0.862
LARP4
Dasypus novemcinctus
ENSDNOG00000018540
N
0.862
LARP4
Sorex araneus
ENSSARG00000012469
N
0.862
LARP4
Procavia capensis
ENSPCAG00000003671
N
0.862
ENSOCUG00000021417
Oryctolagus cuniculus
ENSOCUG00000021417
N
0.862
LARP4
Tetraodon nigroviridis
ENSTNIG00000015109
N
0.862
LARP4
Danio rerio
ENSDARG00000074979
N
0.862
LARP4
Choloepus hoffmanni
ENSCHOG00000010490
N
0.845
LARP4
Gasterosteus aculeatus
ENSGACG00000000680
N
0.845
LARP4
Myotis lucifugus
ENSMLUG00000012513
N
0.845
LARP4
Takifugu rubripes
ENSTRUG00000007206
N
0.828
LARP4
Tetraodon nigroviridis
ENSTNIG00000014571
N
0.810
ENSPPYG00000006330
Pongo pygmaeus
ENSPPYG00000006330
N
0.793
LARP4
Vicugna pacos
ENSVPAG00000010136
N
0.776
LARP4B
Sorex araneus
ENSSARG00000001243
N
0.724
LARP4B
Bos taurus
ENSBTAG00000013899
N
0.724
LARP4B
Sus scrofa
ENSSSCG00000011162
N
0.724
LARP4
Sus scrofa
ENSSSCG00000000219
N
0.724
LOC100057616
Equus caballus
ENSECAG00000024040
N
0.724
LARP4B
Erinaceus europaeus
ENSEEUG00000008391
N
0.724
LARP4
Oryzias latipes
ENSORLG00000018835
N
0.724
LARP4B
Cavia porcellus
ENSCPOG00000009375
N
0.712
LARP4B
Tarsius syrichta
ENSTSYG00000002568
N
0.707
LARP4B
Monodelphis domestica
ENSMODG00000005957
N
0.707
LARP4B
Homo sapiens
ENSG00000107929
N
0.707
LARP4B
Macaca mulatta
ENSMMUG00000005279
N
0.707
LARP4B
Tursiops truncatus
ENSTTRG00000011151
N
0.707
LARP4
Microcebus murinus
ENSMICG00000012388
N
0.707
LARP4B
Loxodonta africana
ENSLAFG00000015334
N
0.707
LARP4B
Myotis lucifugus
ENSMLUG00000005880
N
0.707
Larp4b
Mus musculus
ENSMUSG00000033499
N
0.707
LARP4B
Meleagris gallopavo
ENSMGAG00000005472
N
0.707
ENSTGUG00000013982
Taeniopygia guttata
ENSTGUG00000013982
N
0.707
ENSPPYG00000002035
Pongo pygmaeus
ENSPPYG00000002035
N
0.707
LARP4B
Pan troglodytes
ENSPTRG00000002235
N
0.707
LARP5
Gallus gallus
ENSGALG00000006672
N
0.707
Larp5
Rattus norvegicus
ENSRNOG00000015888
N
0.707
LARP4B
Spermophilus tridecemlineatus
ENSSTOG00000000587
N
0.707
LARP4B
Dasypus novemcinctus
ENSDNOG00000002462
N
0.707
LARP4B
Pteropus vampyrus
ENSPVAG00000009784
N
0.707
LARP4B
Ochotona princeps
ENSOPRG00000003300
N
0.707
LARP5
Taeniopygia guttata
ENSTGUG00000000811
N
0.707
LARP4B
Echinops telfairi
ENSETEG00000011249
N
0.707