CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AAI24888
(
Xenopus laevis
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
AAI24888
T23223_0.6
Xenbase (2010-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAI24888
La
127
184
LKKQLEFCFSRENLSKDLYLMSQMDSDQFVPIWTIANMEGIKKLTTDMDLILEVLRST
Links
Other
La
family RBPs
Other
Xenopus laevis
RBPs
85 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAI30197
Xenopus laevis
AAI30197
N
0.983
larp4
Xenopus tropicalis
ENSXETG00000007283
N
0.966
LARP4
Taeniopygia guttata
ENSTGUG00000003479
N
0.966
LARP4
Meleagris gallopavo
ENSMGAG00000010598
N
0.948
Q5F449_CHICK
Gallus gallus
ENSGALG00000006163
N
0.948
LARP4
Anolis carolinensis
ENSACAG00000017133
N
0.931
LARP4
Monodelphis domestica
ENSMODG00000004844
N
0.914
ENSCPOG00000020519
Cavia porcellus
ENSCPOG00000020519
N
0.914
LOC683071
Rattus norvegicus
ENSRNOG00000042017
N
0.914
A7MB26_BOVIN
Bos taurus
ENSBTAG00000017164
N
0.914
LARP4
Homo sapiens
ENSG00000161813
N
0.897
LARP4
Takifugu rubripes
ENSTRUG00000015939
N
0.897
LARP4
Ornithorhynchus anatinus
ENSOANG00000004373
N
0.897
LARP4
Pteropus vampyrus
ENSPVAG00000016840
N
0.897
LARP4
Gasterosteus aculeatus
ENSGACG00000008381
N
0.897
XR_019868.1
Pan troglodytes
ENSPTRG00000004935
N
0.897
Larp4
Mus musculus
ENSMUSG00000023025
N
0.897
Ame_R010643
Ailuropoda melanoleuca
Ame_R010643
N
0.897
LARP4
Tarsius syrichta
ENSTSYG00000004342
N
0.897
LARP4
Tursiops truncatus
ENSTTRG00000003764
N
0.897
LOC693337
Macaca mulatta
ENSMMUG00000008172
N
0.897
LARP4
Canis familiaris
ENSCAFG00000008174
N
0.897
ENSPPYG00000004512
Pongo pygmaeus
ENSPPYG00000004512
N
0.897
larp4a
Danio rerio
ENSDARG00000078401
N
0.897
LARP4
Gorilla gorilla
ENSGGOG00000015230
N
0.897
LARP4
Callithrix jacchus
ENSCJAG00000021131
N
0.897
LARP4
Tupaia belangeri
ENSTBEG00000005167
N
0.897
LARP4
Equus caballus
ENSECAG00000012479
N
0.897
LARP4
Loxodonta africana
ENSLAFG00000005160
N
0.897
ENSOCUG00000021417
Oryctolagus cuniculus
ENSOCUG00000021417
N
0.879
LARP4
Procavia capensis
ENSPCAG00000003671
N
0.879
LARP4
Oryzias latipes
ENSORLG00000006758
N
0.879
LARP4
Ochotona princeps
ENSOPRG00000004592
N
0.879
ENSOCUG00000026872
Oryctolagus cuniculus
ENSOCUG00000026872
N
0.879
LARP4
Sorex araneus
ENSSARG00000012469
N
0.879
LARP4
Tetraodon nigroviridis
ENSTNIG00000015109
N
0.879
LARP4
Danio rerio
ENSDARG00000074979
N
0.879
LARP4
Dasypus novemcinctus
ENSDNOG00000018540
N
0.879
LARP4
Choloepus hoffmanni
ENSCHOG00000010490
N
0.862
LARP4
Myotis lucifugus
ENSMLUG00000012513
N
0.862
LARP4
Gasterosteus aculeatus
ENSGACG00000000680
N
0.862
LARP4
Tetraodon nigroviridis
ENSTNIG00000014571
N
0.828
LARP4
Takifugu rubripes
ENSTRUG00000007206
N
0.810
ENSPPYG00000006330
Pongo pygmaeus
ENSPPYG00000006330
N
0.810
LARP4
Vicugna pacos
ENSVPAG00000010136
N
0.793
LARP4B
Bos taurus
ENSBTAG00000013899
N
0.741
LARP4
Oryzias latipes
ENSORLG00000018835
N
0.741
LARP4B
Sorex araneus
ENSSARG00000001243
N
0.741
LOC100057616
Equus caballus
ENSECAG00000024040
N
0.741
LARP4B
Sus scrofa
ENSSSCG00000011162
N
0.741
LARP4B
Erinaceus europaeus
ENSEEUG00000008391
N
0.741
LARP4
Sus scrofa
ENSSSCG00000000219
N
0.741
LARP4B
Cavia porcellus
ENSCPOG00000009375
N
0.729
ENSTGUG00000013982
Taeniopygia guttata
ENSTGUG00000013982
N
0.724
LARP5
Taeniopygia guttata
ENSTGUG00000000811
N
0.724
LARP4B
Tarsius syrichta
ENSTSYG00000002568
N
0.724
LARP4B
Tursiops truncatus
ENSTTRG00000011151
N
0.724
Larp5
Rattus norvegicus
ENSRNOG00000015888
N
0.724
Larp4b
Mus musculus
ENSMUSG00000033499
N
0.724
LARP4B
Pan troglodytes
ENSPTRG00000002235
N
0.724
LARP4
Microcebus murinus
ENSMICG00000012388
N
0.724
LARP4B
Myotis lucifugus
ENSMLUG00000005880
N
0.724
LARP4B
Loxodonta africana
ENSLAFG00000015334
N
0.724
LARP5
Gallus gallus
ENSGALG00000006672
N
0.724
LARP4B
Dasypus novemcinctus
ENSDNOG00000002462
N
0.724
LARP4B
Echinops telfairi
ENSETEG00000011249
N
0.724
LARP4B
Homo sapiens
ENSG00000107929
N
0.724
LARP4B
Macaca mulatta
ENSMMUG00000005279
N
0.724
LARP4B
Meleagris gallopavo
ENSMGAG00000005472
N
0.724
ENSPPYG00000002035
Pongo pygmaeus
ENSPPYG00000002035
N
0.724
LARP4B
Ochotona princeps
ENSOPRG00000003300
N
0.724
LARP4B
Monodelphis domestica
ENSMODG00000005957
N
0.724
LARP4B
Gorilla gorilla
ENSGGOG00000003572
N
0.712
LARP4B
Oryctolagus cuniculus
ENSOCUG00000004950
N
0.712
LARP4B
Ornithorhynchus anatinus
ENSOANG00000006100
N
0.712
LARP4B
Canis familiaris
ENSCAFG00000005546
N
0.707
larp4b
Xenopus tropicalis
ENSXETG00000016882
N
0.707
Ame_R012731
Ailuropoda melanoleuca
Ame_R012731
N
0.707
LARP4B
Choloepus hoffmanni
ENSCHOG00000007831
N
0.707
LARP4B
Anolis carolinensis
ENSACAG00000002858
N
0.707
LARP4
Echinops telfairi
ENSETEG00000011683
N
0.707
LARP4
Otolemur garnettii
ENSOGAG00000001415
N
0.707
LARP4B
Spermophilus tridecemlineatus
ENSSTOG00000000587
N
0.707
ENSRNOG00000032588
Rattus norvegicus
ENSRNOG00000032588
N
0.707
LARP4
Erinaceus europaeus
ENSEEUG00000000316
N
0.707