CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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SHARPIN
(
Gallus gallus
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSGALG00000022341
T26504_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGALP00000035146
RanBP ZF
113
140
AGWSCPKCTFINKPTRPGCEMCSTDRPP
Links
Other
RanBP ZF
family RBPs
Other
Gallus gallus
RBPs
44 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSMGAG00000007903
Meleagris gallopavo
ENSMGAG00000007903
N
0.929
SHARPIN
Anolis carolinensis
ENSACAG00000007245
N
0.857
LOC100065232
Equus caballus
ENSECAG00000001400
N
0.786
CU693494.1
Danio rerio
ENSDARG00000076995
N
0.786
SHARPIN
Monodelphis domestica
ENSMODG00000010491
N
0.786
ENSORLG00000007392
Oryzias latipes
ENSORLG00000007392
N
0.786
RBCK1
Canis familiaris
ENSCAFG00000006921
N
0.786
SHARPIN
Sus scrofa
ENSSSCG00000005914
N
0.786
ENSTRUG00000006949
Takifugu rubripes
ENSTRUG00000006949
N
0.786
ENSGACG00000002544
Gasterosteus aculeatus
ENSGACG00000002544
N
0.786
Q1JPC8_BOVIN
Bos taurus
ENSBTAG00000017002
N
0.750
SHARPIN
Bos taurus
ENSBTAG00000012235
N
0.750
Ame_R013963
Ailuropoda melanoleuca
Ame_R013963
N
0.750
A6ML91_CALJA
Callithrix jacchus
ENSCJAG00000020846
N
0.750
SHARPIN
Cavia porcellus
ENSCPOG00000013242
N
0.750
RBCK1
Felis catus
ENSFCAG00000003278
N
0.750
RBCK1
Homo sapiens
ENSG00000125826
N
0.750
SHARPIN
Homo sapiens
ENSG00000179526
N
0.750
RBCK1
Erinaceus europaeus
ENSEEUG00000013802
N
0.750
rbck1
Danio rerio
ENSDARG00000031954
N
0.750
RBCK1
Cavia porcellus
ENSCPOG00000005720
N
0.750
RBCK1
Vicugna pacos
ENSVPAG00000000451
N
0.750
LOC100392136
Callithrix jacchus
ENSCJAG00000021452
N
0.750
RBCK1
Tupaia belangeri
ENSTBEG00000013740
N
0.750
Sharpin
Mus musculus
ENSMUSG00000022552
N
0.750
Rbck1
Mus musculus
ENSMUSG00000027466
N
0.750
RBCK1
Tursiops truncatus
ENSTTRG00000005104
N
0.750
RBCK1
Macaca mulatta
ENSMMUG00000012601
N
0.750
RBCK1
Microcebus murinus
ENSMICG00000013495
N
0.750
SHARPIN
Gorilla gorilla
ENSGGOG00000027471
N
0.750
RBCK1
Loxodonta africana
ENSLAFG00000027558
N
0.750
RBCK1
Procavia capensis
ENSPCAG00000001109
N
0.750
RBCK1
Oryctolagus cuniculus
ENSOCUG00000007636
N
0.750
Sharpin
Rattus norvegicus
ENSRNOG00000012812
N
0.750
RBCK1
Spermophilus tridecemlineatus
ENSSTOG00000008625
N
0.750
RBCK1
Gorilla gorilla
ENSGGOG00000008982
N
0.750
ENSPPYG00000010868
Pongo pygmaeus
ENSPPYG00000010868
N
0.750
Rbck1
Rattus norvegicus
ENSRNOG00000006695
N
0.750
RBCK1
Pan troglodytes
ENSPTRG00000013144
N
0.750
RBCK1
Pteropus vampyrus
ENSPVAG00000011249
N
0.750
RBCK1
Monodelphis domestica
ENSMODG00000019512
N
0.714
SHARPIN
Macaca mulatta
ENSMMUG00000007152
N
0.714
RBCK1
Gasterosteus aculeatus
ENSGACG00000006056
N
0.700
RBCK1
Dasypus novemcinctus
ENSDNOG00000017407
N
0.700