CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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NUP153
(
Gallus gallus
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSGALG00000012720
T26503_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGALP00000020737
RanBP ZF
625
645
PCSQNKAADSKCVTCQAAKVS
ENSGALP00000020737
RanBP ZF
682
710
PGTWDCDTCLVQNKPEATKCVACETPKPG
ENSGALP00000020737
RanBP ZF
751
780
PKGSWDCATCFVSNKAEDSKCVACQSEKPG
ENSGALP00000020737
RanBP ZF
809
838
PEGSWDCEVCLVQNKAEATKCVACESAKPG
Links
Other
RanBP ZF
family RBPs
Other
Gallus gallus
RBPs
28 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NUP153
Meleagris gallopavo
ENSMGAG00000003139
N
0.927
NUP153
Taeniopygia guttata
ENSTGUG00000005917
N
0.827
NUP153
Monodelphis domestica
ENSMODG00000010951
N
0.760
NUP153
Ornithorhynchus anatinus
ENSOANG00000011858
N
0.758
NUP153
Felis catus
ENSFCAG00000011583
N
0.729
NUP153
Erinaceus europaeus
ENSEEUG00000010183
N
0.725
Ame_R015605
Ailuropoda melanoleuca
Ame_R015605
N
0.725
NUP153
Canis familiaris
ENSCAFG00000010146
N
0.725
Nup153
Rattus norvegicus
ENSRNOG00000001456
N
0.725
NUP153
Tupaia belangeri
ENSTBEG00000004161
N
0.725
NUP153
Anolis carolinensis
ENSACAG00000004118
N
0.720
Nup153
Dipodomys ordii
ENSDORG00000001736
N
0.717
NUP153
Otolemur garnettii
ENSOGAG00000014899
N
0.717
NUP153
Vicugna pacos
ENSVPAG00000002072
N
0.717
NUP153
Oryctolagus cuniculus
ENSOCUG00000003064
N
0.714
NUP153
Pan troglodytes
ENSPTRG00000017752
N
0.711
NUP153
Gorilla gorilla
ENSGGOG00000014261
N
0.711
NUP153
Macaca mulatta
ENSMMUG00000001993
N
0.711
NUP153
Homo sapiens
ENSG00000124789
N
0.711
NUP153
Cavia porcellus
ENSCPOG00000004007
N
0.708
NUP153
Equus caballus
ENSECAG00000016010
N
0.708
NUP153
Sorex araneus
ENSSARG00000013269
N
0.708
ENSTSYG00000001251
Tarsius syrichta
ENSTSYG00000001251
N
0.708
NUP153
Pteropus vampyrus
ENSPVAG00000012632
N
0.708
NUP153
Callithrix jacchus
ENSCJAG00000006685
N
0.702
ENSPPYG00000016259
Pongo pygmaeus
ENSPPYG00000016259
N
0.702
Nup153
Mus musculus
ENSMUSG00000021374
N
0.700
NUP153
Ochotona princeps
ENSOPRG00000006221
N
0.700