CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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NUP153
(
Sorex araneus
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSSARG00000013269
T26784_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSARP00000011985
RanBP ZF
618
648
KDGSLWQCQVCLVQNKVTDSKCSACQATKLP
ENSSARP00000011985
RanBP ZF
684
712
VGTWDCDTCLVQNKPEAIKCVACETPKPG
ENSSARP00000011985
RanBP ZF
754
783
PVGSWECPVCSVVNKAEDSKCVSCMSEKPG
ENSSARP00000011985
RanBP ZF
812
841
PEGSWDCEVCLVQNKADCTKCAACGNAKPG
Links
Other
RanBP ZF
family RBPs
Other
Sorex araneus
RBPs
37 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NUP153
Canis familiaris
ENSCAFG00000010146
N
0.867
Ame_R015605
Ailuropoda melanoleuca
Ame_R015605
N
0.858
NUP153
Pteropus vampyrus
ENSPVAG00000012632
N
0.858
Nup153
Dipodomys ordii
ENSDORG00000001736
N
0.850
Nup153
Rattus norvegicus
ENSRNOG00000001456
N
0.850
NUP153
Otolemur garnettii
ENSOGAG00000014899
N
0.842
NUP153
Equus caballus
ENSECAG00000016010
N
0.842
NUP153
Erinaceus europaeus
ENSEEUG00000010183
N
0.842
NUP153
Vicugna pacos
ENSVPAG00000002072
N
0.842
NUP153
Bos taurus
ENSBTAG00000017128
N
0.833
Nup153
Mus musculus
ENSMUSG00000021374
N
0.833
NUP153
Macaca mulatta
ENSMMUG00000001993
N
0.826
NUP153
Felis catus
ENSFCAG00000011583
N
0.825
ENSTSYG00000001251
Tarsius syrichta
ENSTSYG00000001251
N
0.825
ENSPPYG00000016259
Pongo pygmaeus
ENSPPYG00000016259
N
0.818
NUP153
Homo sapiens
ENSG00000124789
N
0.818
NUP153
Pan troglodytes
ENSPTRG00000017752
N
0.818
NUP153
Gorilla gorilla
ENSGGOG00000014261
N
0.818
NUP153
Tupaia belangeri
ENSTBEG00000004161
N
0.817
NUP153
Myotis lucifugus
ENSMLUG00000004775
N
0.810
NUP153
Ornithorhynchus anatinus
ENSOANG00000011858
N
0.808
NUP153
Ochotona princeps
ENSOPRG00000006221
N
0.802
NUP153
Callithrix jacchus
ENSCJAG00000006685
N
0.802
NUP153
Monodelphis domestica
ENSMODG00000010951
N
0.802
NUP153
Loxodonta africana
ENSLAFG00000015905
N
0.800
NUP153
Oryctolagus cuniculus
ENSOCUG00000003064
N
0.793
ENSTSYG00000010775
Tarsius syrichta
ENSTSYG00000010775
N
0.783
NUP153
Cavia porcellus
ENSCPOG00000004007
N
0.775
ENSTSYG00000001592
Tarsius syrichta
ENSTSYG00000001592
N
0.742
NUP153
Procavia capensis
ENSPCAG00000010444
N
0.733
ENSCHOG00000008316
Choloepus hoffmanni
ENSCHOG00000008316
N
0.725
ENSCHOG00000003510
Choloepus hoffmanni
ENSCHOG00000003510
N
0.725
ENSCHOG00000013388
Choloepus hoffmanni
ENSCHOG00000013388
N
0.719
ENSCHOG00000007137
Choloepus hoffmanni
ENSCHOG00000007137
N
0.717
ENSCHOG00000009608
Choloepus hoffmanni
ENSCHOG00000009608
N
0.717
NUP153
Anolis carolinensis
ENSACAG00000004118
N
0.717
NUP153
Gallus gallus
ENSGALG00000012720
N
0.708