CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
NUP153
(
Otolemur garnettii
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSOGAG00000014899
T26666_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000013348
RanBP ZF
659
689
KAGSSWQCDTCLLQNKVTDNKCIACQAAKLP
ENSOGAP00000013348
RanBP ZF
725
753
IGTWDCDTCLVQNKPEAIKCVACETPKPG
ENSOGAP00000013348
RanBP ZF
795
824
PLGSWECSVCCVSNNSEDNKCVSCMSEKPG
ENSOGAP00000013348
RanBP ZF
853
882
PEGSWDCEVCLVQNKADATKCAACESAKPG
Links
Other
RanBP ZF
family RBPs
Other
Otolemur garnettii
RBPs
37 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NUP153
Homo sapiens
ENSG00000124789
N
0.942
NUP153
Pan troglodytes
ENSPTRG00000017752
N
0.942
NUP153
Macaca mulatta
ENSMMUG00000001993
N
0.942
NUP153
Gorilla gorilla
ENSGGOG00000014261
N
0.942
Nup153
Dipodomys ordii
ENSDORG00000001736
N
0.942
ENSPPYG00000016259
Pongo pygmaeus
ENSPPYG00000016259
N
0.934
ENSTSYG00000001251
Tarsius syrichta
ENSTSYG00000001251
N
0.933
NUP153
Vicugna pacos
ENSVPAG00000002072
N
0.925
NUP153
Callithrix jacchus
ENSCJAG00000006685
N
0.917
Nup153
Rattus norvegicus
ENSRNOG00000001456
N
0.917
NUP153
Pteropus vampyrus
ENSPVAG00000012632
N
0.917
Nup153
Mus musculus
ENSMUSG00000021374
N
0.908
NUP153
Equus caballus
ENSECAG00000016010
N
0.900
NUP153
Canis familiaris
ENSCAFG00000010146
N
0.900
ENSTSYG00000010775
Tarsius syrichta
ENSTSYG00000010775
N
0.900
Ame_R015605
Ailuropoda melanoleuca
Ame_R015605
N
0.900
NUP153
Bos taurus
ENSBTAG00000017128
N
0.883
NUP153
Erinaceus europaeus
ENSEEUG00000010183
N
0.883
NUP153
Felis catus
ENSFCAG00000011583
N
0.883
NUP153
Myotis lucifugus
ENSMLUG00000004775
N
0.876
NUP153
Tupaia belangeri
ENSTBEG00000004161
N
0.858
NUP153
Ochotona princeps
ENSOPRG00000006221
N
0.851
ENSTSYG00000001592
Tarsius syrichta
ENSTSYG00000001592
N
0.850
NUP153
Cavia porcellus
ENSCPOG00000004007
N
0.850
NUP153
Ornithorhynchus anatinus
ENSOANG00000011858
N
0.850
NUP153
Sorex araneus
ENSSARG00000013269
N
0.842
NUP153
Oryctolagus cuniculus
ENSOCUG00000003064
N
0.835
NUP153
Loxodonta africana
ENSLAFG00000015905
N
0.833
NUP153
Procavia capensis
ENSPCAG00000010444
N
0.825
NUP153
Monodelphis domestica
ENSMODG00000010951
N
0.810
ENSCHOG00000003510
Choloepus hoffmanni
ENSCHOG00000003510
N
0.800
ENSCHOG00000008316
Choloepus hoffmanni
ENSCHOG00000008316
N
0.783
ENSCHOG00000007137
Choloepus hoffmanni
ENSCHOG00000007137
N
0.783
ENSCHOG00000009608
Choloepus hoffmanni
ENSCHOG00000009608
N
0.783
NUP153
Anolis carolinensis
ENSACAG00000004118
N
0.775
ENSCHOG00000013388
Choloepus hoffmanni
ENSCHOG00000013388
N
0.744
NUP153
Gallus gallus
ENSGALG00000012720
N
0.717