CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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NUP153
(
Felis catus
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSFCAG00000011583
T26457_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFCAP00000010754
RanBP ZF
664
692
SSSWQCDTCLLQNKATDGKCIACQATKLP
ENSFCAP00000010754
RanBP ZF
728
756
VGTWDCDTCLVQNKPEAMKCVACETPKPG
ENSFCAP00000010754
RanBP ZF
798
827
PLGSWECPVCCVSNNGEDSKCVSCVSEKPG
ENSFCAP00000010754
RanBP ZF
856
885
PEGSWDCEVCLVQNKADSTKCIACESAKPG
Links
Other
RanBP ZF
family RBPs
Other
Felis catus
RBPs
38 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R015605
Ailuropoda melanoleuca
Ame_R015605
N
0.908
NUP153
Canis familiaris
ENSCAFG00000010146
N
0.900
Nup153
Rattus norvegicus
ENSRNOG00000001456
N
0.892
Nup153
Dipodomys ordii
ENSDORG00000001736
N
0.883
NUP153
Pteropus vampyrus
ENSPVAG00000012632
N
0.883
NUP153
Otolemur garnettii
ENSOGAG00000014899
N
0.883
NUP153
Equus caballus
ENSECAG00000016010
N
0.875
NUP153
Vicugna pacos
ENSVPAG00000002072
N
0.875
Nup153
Mus musculus
ENSMUSG00000021374
N
0.867
NUP153
Gorilla gorilla
ENSGGOG00000014261
N
0.860
NUP153
Macaca mulatta
ENSMMUG00000001993
N
0.860
NUP153
Homo sapiens
ENSG00000124789
N
0.860
NUP153
Pan troglodytes
ENSPTRG00000017752
N
0.860
ENSTSYG00000001251
Tarsius syrichta
ENSTSYG00000001251
N
0.858
NUP153
Bos taurus
ENSBTAG00000017128
N
0.858
ENSPPYG00000016259
Pongo pygmaeus
ENSPPYG00000016259
N
0.851
NUP153
Ochotona princeps
ENSOPRG00000006221
N
0.850
NUP153
Callithrix jacchus
ENSCJAG00000006685
N
0.843
NUP153
Oryctolagus cuniculus
ENSOCUG00000003064
N
0.840
NUP153
Myotis lucifugus
ENSMLUG00000004775
N
0.835
ENSTSYG00000010775
Tarsius syrichta
ENSTSYG00000010775
N
0.833
NUP153
Erinaceus europaeus
ENSEEUG00000010183
N
0.833
NUP153
Loxodonta africana
ENSLAFG00000015905
N
0.833
NUP153
Sorex araneus
ENSSARG00000013269
N
0.825
NUP153
Cavia porcellus
ENSCPOG00000004007
N
0.817
NUP153
Ornithorhynchus anatinus
ENSOANG00000011858
N
0.817
NUP153
Tupaia belangeri
ENSTBEG00000004161
N
0.808
ENSTSYG00000001592
Tarsius syrichta
ENSTSYG00000001592
N
0.783
NUP153
Monodelphis domestica
ENSMODG00000010951
N
0.777
NUP153
Anolis carolinensis
ENSACAG00000004118
N
0.771
NUP153
Procavia capensis
ENSPCAG00000010444
N
0.767
ENSCHOG00000003510
Choloepus hoffmanni
ENSCHOG00000003510
N
0.758
ENSCHOG00000008316
Choloepus hoffmanni
ENSCHOG00000008316
N
0.742
ENSCHOG00000009608
Choloepus hoffmanni
ENSCHOG00000009608
N
0.742
ENSCHOG00000007137
Choloepus hoffmanni
ENSCHOG00000007137
N
0.742
NUP153
Gallus gallus
ENSGALG00000012720
N
0.729
ENSCHOG00000013388
Choloepus hoffmanni
ENSCHOG00000013388
N
0.719
NUP153
Meleagris gallopavo
ENSMGAG00000003139
N
0.703