CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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NUP153
(
Cavia porcellus
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSCPOG00000004007
T26348_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCPOP00000003615
RanBP ZF
654
684
KAGSYWHCDTCLLQNKVTDNKCIACQAVKST
ENSCPOP00000003615
RanBP ZF
720
748
IGSWDCDTCLVRNKPEAMKCVACETPKPG
ENSCPOP00000003615
RanBP ZF
790
819
PVGSWDCTVCCVSNNAEDSKCVACMSEKPG
ENSCPOP00000003615
RanBP ZF
848
877
PEGSWDCEVCLVQNKADSVKCVACESGKPG
Links
Other
RanBP ZF
family RBPs
Other
Cavia porcellus
RBPs
36 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NUP153
Macaca mulatta
ENSMMUG00000001993
N
0.860
Nup153
Dipodomys ordii
ENSDORG00000001736
N
0.858
Nup153
Rattus norvegicus
ENSRNOG00000001456
N
0.858
ENSTSYG00000001251
Tarsius syrichta
ENSTSYG00000001251
N
0.858
NUP153
Callithrix jacchus
ENSCJAG00000006685
N
0.851
NUP153
Pan troglodytes
ENSPTRG00000017752
N
0.851
ENSPPYG00000016259
Pongo pygmaeus
ENSPPYG00000016259
N
0.851
NUP153
Gorilla gorilla
ENSGGOG00000014261
N
0.851
NUP153
Homo sapiens
ENSG00000124789
N
0.851
NUP153
Otolemur garnettii
ENSOGAG00000014899
N
0.850
NUP153
Equus caballus
ENSECAG00000016010
N
0.850
NUP153
Erinaceus europaeus
ENSEEUG00000010183
N
0.842
Nup153
Mus musculus
ENSMUSG00000021374
N
0.842
NUP153
Pteropus vampyrus
ENSPVAG00000012632
N
0.842
NUP153
Myotis lucifugus
ENSMLUG00000004775
N
0.826
NUP153
Bos taurus
ENSBTAG00000017128
N
0.825
NUP153
Vicugna pacos
ENSVPAG00000002072
N
0.825
NUP153
Canis familiaris
ENSCAFG00000010146
N
0.825
Ame_R015605
Ailuropoda melanoleuca
Ame_R015605
N
0.825
ENSTSYG00000010775
Tarsius syrichta
ENSTSYG00000010775
N
0.817
NUP153
Felis catus
ENSFCAG00000011583
N
0.817
NUP153
Ochotona princeps
ENSOPRG00000006221
N
0.802
NUP153
Ornithorhynchus anatinus
ENSOANG00000011858
N
0.792
NUP153
Oryctolagus cuniculus
ENSOCUG00000003064
N
0.785
NUP153
Monodelphis domestica
ENSMODG00000010951
N
0.785
NUP153
Procavia capensis
ENSPCAG00000010444
N
0.783
ENSTSYG00000001592
Tarsius syrichta
ENSTSYG00000001592
N
0.783
NUP153
Tupaia belangeri
ENSTBEG00000004161
N
0.783
NUP153
Sorex araneus
ENSSARG00000013269
N
0.775
NUP153
Loxodonta africana
ENSLAFG00000015905
N
0.775
NUP153
Anolis carolinensis
ENSACAG00000004118
N
0.742
ENSCHOG00000003510
Choloepus hoffmanni
ENSCHOG00000003510
N
0.733
NUP153
Gallus gallus
ENSGALG00000012720
N
0.708
ENSCHOG00000009608
Choloepus hoffmanni
ENSCHOG00000009608
N
0.708
ENSCHOG00000007137
Choloepus hoffmanni
ENSCHOG00000007137
N
0.708
ENSCHOG00000008316
Choloepus hoffmanni
ENSCHOG00000008316
N
0.708