CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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NUP153
(
Oryctolagus cuniculus
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSOCUG00000003064
T26646_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000002670
RanBP ZF
662
690
APSWQCDTCLLQNKLTDNKCVACQAAKSP
ENSOCUP00000002670
RanBP ZF
725
754
PVGTWDCDTCLVQNKPEATKCVACETPKPG
ENSOCUP00000002670
RanBP ZF
796
825
PVGSWECPICCVTNNAEDNKCVSCMSEKPG
ENSOCUP00000002670
RanBP ZF
854
883
PEGSWDCDVCLVQNKADSTKCVACKCAKPG
Links
Other
RanBP ZF
family RBPs
Other
Oryctolagus cuniculus
RBPs
37 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NUP153
Ochotona princeps
ENSOPRG00000006221
N
0.925
NUP153
Equus caballus
ENSECAG00000016010
N
0.876
Nup153
Dipodomys ordii
ENSDORG00000001736
N
0.860
NUP153
Pteropus vampyrus
ENSPVAG00000012632
N
0.851
NUP153
Callithrix jacchus
ENSCJAG00000006685
N
0.851
NUP153
Vicugna pacos
ENSVPAG00000002072
N
0.843
Ame_R015605
Ailuropoda melanoleuca
Ame_R015605
N
0.843
NUP153
Macaca mulatta
ENSMMUG00000001993
N
0.843
ENSTSYG00000001251
Tarsius syrichta
ENSTSYG00000001251
N
0.843
NUP153
Felis catus
ENSFCAG00000011583
N
0.840
NUP153
Otolemur garnettii
ENSOGAG00000014899
N
0.835
NUP153
Gorilla gorilla
ENSGGOG00000014261
N
0.835
Nup153
Mus musculus
ENSMUSG00000021374
N
0.835
NUP153
Homo sapiens
ENSG00000124789
N
0.835
NUP153
Canis familiaris
ENSCAFG00000010146
N
0.835
NUP153
Bos taurus
ENSBTAG00000017128
N
0.835
Nup153
Rattus norvegicus
ENSRNOG00000001456
N
0.835
NUP153
Pan troglodytes
ENSPTRG00000017752
N
0.835
ENSPPYG00000016259
Pongo pygmaeus
ENSPPYG00000016259
N
0.835
NUP153
Erinaceus europaeus
ENSEEUG00000010183
N
0.818
ENSTSYG00000010775
Tarsius syrichta
ENSTSYG00000010775
N
0.818
NUP153
Tupaia belangeri
ENSTBEG00000004161
N
0.818
NUP153
Myotis lucifugus
ENSMLUG00000004775
N
0.803
NUP153
Loxodonta africana
ENSLAFG00000015905
N
0.802
NUP153
Ornithorhynchus anatinus
ENSOANG00000011858
N
0.793
NUP153
Sorex araneus
ENSSARG00000013269
N
0.793
NUP153
Monodelphis domestica
ENSMODG00000010951
N
0.787
NUP153
Cavia porcellus
ENSCPOG00000004007
N
0.785
ENSTSYG00000001592
Tarsius syrichta
ENSTSYG00000001592
N
0.777
NUP153
Procavia capensis
ENSPCAG00000010444
N
0.752
NUP153
Anolis carolinensis
ENSACAG00000004118
N
0.739
ENSCHOG00000007137
Choloepus hoffmanni
ENSCHOG00000007137
N
0.736
ENSCHOG00000003510
Choloepus hoffmanni
ENSCHOG00000003510
N
0.736
ENSCHOG00000008316
Choloepus hoffmanni
ENSCHOG00000008316
N
0.736
ENSCHOG00000009608
Choloepus hoffmanni
ENSCHOG00000009608
N
0.736
NUP153
Gallus gallus
ENSGALG00000012720
N
0.714
ENSCHOG00000013388
Choloepus hoffmanni
ENSCHOG00000013388
N
0.711