CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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NUP153
(
Myotis lucifugus
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSMLUG00000004775
T26574_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMLUP00000004357
RanBP ZF
655
685
KAGSSWQCDSCLLQNKVTDSKCIACQATKSP
ENSMLUP00000004357
RanBP ZF
721
749
IGTWDCDTCLVRNKPEAIKCVACETPKPG
ENSMLUP00000004357
RanBP ZF
790
820
KPKRSWECPVCCVPNNPEDNKCVSCMSEKPG
ENSMLUP00000004357
RanBP ZF
849
878
PEGSWECEVCLVQNKADSTKCVACESARPG
Links
Other
RanBP ZF
family RBPs
Other
Myotis lucifugus
RBPs
35 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NUP153
Pteropus vampyrus
ENSPVAG00000012632
N
0.884
NUP153
Otolemur garnettii
ENSOGAG00000014899
N
0.876
Nup153
Dipodomys ordii
ENSDORG00000001736
N
0.876
NUP153
Equus caballus
ENSECAG00000016010
N
0.876
Ame_R015605
Ailuropoda melanoleuca
Ame_R015605
N
0.868
NUP153
Canis familiaris
ENSCAFG00000010146
N
0.868
NUP153
Vicugna pacos
ENSVPAG00000002072
N
0.868
NUP153
Callithrix jacchus
ENSCJAG00000006685
N
0.861
NUP153
Macaca mulatta
ENSMMUG00000001993
N
0.861
NUP153
Gorilla gorilla
ENSGGOG00000014261
N
0.861
NUP153
Homo sapiens
ENSG00000124789
N
0.861
NUP153
Pan troglodytes
ENSPTRG00000017752
N
0.861
ENSTSYG00000001251
Tarsius syrichta
ENSTSYG00000001251
N
0.860
ENSPPYG00000016259
Pongo pygmaeus
ENSPPYG00000016259
N
0.852
Nup153
Mus musculus
ENSMUSG00000021374
N
0.851
Nup153
Rattus norvegicus
ENSRNOG00000001456
N
0.851
NUP153
Bos taurus
ENSBTAG00000017128
N
0.843
ENSTSYG00000010775
Tarsius syrichta
ENSTSYG00000010775
N
0.835
NUP153
Felis catus
ENSFCAG00000011583
N
0.835
NUP153
Cavia porcellus
ENSCPOG00000004007
N
0.826
NUP153
Erinaceus europaeus
ENSEEUG00000010183
N
0.826
NUP153
Ochotona princeps
ENSOPRG00000006221
N
0.820
NUP153
Sorex araneus
ENSSARG00000013269
N
0.810
NUP153
Oryctolagus cuniculus
ENSOCUG00000003064
N
0.803
NUP153
Ornithorhynchus anatinus
ENSOANG00000011858
N
0.793
NUP153
Tupaia belangeri
ENSTBEG00000004161
N
0.793
ENSTSYG00000001592
Tarsius syrichta
ENSTSYG00000001592
N
0.785
NUP153
Monodelphis domestica
ENSMODG00000010951
N
0.785
NUP153
Loxodonta africana
ENSLAFG00000015905
N
0.777
NUP153
Procavia capensis
ENSPCAG00000010444
N
0.760
ENSCHOG00000003510
Choloepus hoffmanni
ENSCHOG00000003510
N
0.736
ENSCHOG00000008316
Choloepus hoffmanni
ENSCHOG00000008316
N
0.727
ENSCHOG00000007137
Choloepus hoffmanni
ENSCHOG00000007137
N
0.719
ENSCHOG00000009608
Choloepus hoffmanni
ENSCHOG00000009608
N
0.719
ENSCHOG00000013388
Choloepus hoffmanni
ENSCHOG00000013388
N
0.713