CC1G_01457 (Coprinopsis cinerea)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CC1G_01457 T28521_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CC1G_01457T0 RRM 33 103

Links

Other RRM family RBPs
Other Coprinopsis cinerea RBPs

23 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_Genewise1Plus.C_10678 Schizophyllum commune estExt_Genewise1Plus.C_10678 N 0.873
gw1.4.1321.1 Pleurotus ostreatus gw1.4.1321.1 N 0.873
gwh2.2.841.1 Phanerochaete chrysosporium gwh2.2.841.1 N 0.859
gw1.4.2036.1 Heterobasidion annosum gw1.4.2036.1 N 0.859
gwh1.4.608.1 Laccaria bicolor gwh1.4.608.1 N 0.859
estExt_fgenesh2_kg.C_140042 Agaricus bisporus estExt_fgenesh2_kg.C_140042 N 0.845
estExt_fgenesh3_pg.C_500008 Postia placenta estExt_fgenesh3_pg.C_500008 N 0.845
estExt_fgenesh2_kg.C_42587 Serpula lacrymans estExt_fgenesh2_kg.C_42587 N 0.817
e_gw1.2.1042.1 Sporobolomyces roseus e_gw1.2.1042.1 N 0.761
fgenesh2_pg.C_sca_10000115 Lottia gigantea fgenesh2_pg.C_sca_10000115 N 0.746
ANIA_04665 Aspergillus nidulans CADANIAG00005768 N 0.732
An07g05140 Aspergillus niger CADANGAG00005786 N 0.732
fgenesh1_pg.00771_#_290 Aspergillus carbonarius fgenesh1_pg.00771_#_290 N 0.732
ATEG_05773 Aspergillus terreus CADATEAG00002943 N 0.732
nasonia_NCBI_hmm382923 Nasonia vitripennis nasonia_NCBI_hmm382923 N 0.732
NFIA_078760 Neosartorya fischeri CADNFIAG00007376 N 0.718
gw1.1.3012.1 Tremella mesenterica gw1.1.3012.1 N 0.718
Pc22g16450 Penicillium chrysogenum Pc22g16450 N 0.704
estExt_Genewise1Plus.C_110324 Daphnia pulex estExt_Genewise1Plus.C_110324 N 0.704
AGAP000977 Anopheles gambiae AGAP000977 N 0.704
ACLA_012010 Aspergillus clavatus CADACLAG00000982 N 0.704
145168 Helobdella robusta 145168 N 0.704
PredSwiss_CON1238.1 Pneumocystis carinii PredSwiss_CON1238.1 N 0.704