CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ANIA_04665
(
Aspergillus nidulans
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CADANIAG00005768
T33627_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADANIAP00005768
RRM
35
105
IYIGGLPFDLSEGDIVTIFSQYGEPVHINLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRVLR
Links
Other
RRM
family RBPs
Other
Aspergillus nidulans
RBPs
61 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
fgenesh1_pg.00771_#_290
Aspergillus carbonarius
fgenesh1_pg.00771_#_290
N
0.986
An07g05140
Aspergillus niger
CADANGAG00005786
N
0.986
MCYG_01624
Microsporum canis
MCYG_01624
N
0.944
ATEG_05773
Aspergillus terreus
CADATEAG00002943
N
0.944
TEQG_02324
Trichophyton equinum
TEQG_02324
N
0.944
ARB_06649
Arthroderma benhamiae
ARB_06649
N
0.944
TERG_07863
Trichophyton rubrum
TERG_07863
N
0.944
ACLA_012010
Aspergillus clavatus
CADACLAG00000982
N
0.944
TRV_02420
Trichophyton verrucosum
TRV_02420
N
0.944
TESG_00774
Trichophyton tonsurans
TESG_00774
N
0.944
PMAA_079770
Penicillium marneffei
PMAA_079770
N
0.930
MGYG_04448
Microsporum gypseum
MGYG_04448
N
0.930
Pc22g16450
Penicillium chrysogenum
Pc22g16450
N
0.930
NFIA_078760
Neosartorya fischeri
CADNFIAG00007376
N
0.930
BDBG_01138
Blastomyces dermatitidis
BDBG_01138
N
0.901
HCAG_00719
Histoplasma capsulatum
HCAG_00719
N
0.887
PABG_03870
Paracoccidioides brasiliensis
PABG_03870
N
0.887
CPSG_07351
Coccidioides posadasii
CPSG_07351
N
0.873
CIMG_06780
Coccidioides immitis
CIMG_06780
N
0.873
UREG_03685
Uncinocarpus reesii
UREG_03685
N
0.859
BC1G_09608
Botrytis cinerea
BC1G_09608
N
0.845
SS1G_03313
Sclerotinia sclerotiorum
SS1G_03313
N
0.845
estExt_fgenesh1_pg.C_chr_10724
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_10724
N
0.845
fgenesh1_pm.C_scaffold_1000287
Mycosphaerella fijiensis
fgenesh1_pm.C_scaffold_1000287
N
0.831
GSTUMT00000089001
Tuber melanosporum
GSTUMT00000089001
N
0.817
gw1.16.255.1
Trichoderma reesei
gw1.16.255.1
N
0.803
estExt_Genewise1.C_160643
Cochliobolus heterostrophus C5
estExt_Genewise1.C_160643
N
0.803
PTRG_01927
Pyrenophora tritici repentis
PTRG_01927
N
0.789
SNOG_03018
Stagonospora nodorum
SNOG_03018
N
0.789
EAT89749.2
Phaeosphaeria nodorum
EAT89749.2
N
0.789
e_gw1.12.826.1
Trichoderma virens
e_gw1.12.826.1
N
0.775
e_gw1.18.2245.1
Nectria haematococca
e_gw1.18.2245.1
N
0.775
gw1.5.1175.1
Trichoderma atroviride
gw1.5.1175.1
N
0.775
e_gw1.1.5996.1
Thielavia terrestris
e_gw1.1.5996.1
N
0.775
PredSwiss_CON1238.1
Pneumocystis carinii
PredSwiss_CON1238.1
N
0.775
estExt_fgenesh1_kg.C_50230
Cryphonectria parasitica
estExt_fgenesh1_kg.C_50230
N
0.775
AB08288.1
Alternaria brassicicola
AB08288.1
N
0.775
gw1.1.2440.1
Mucor circinelloides
gw1.1.2440.1
N
0.761
estExt_Genewise1.C_21128
Neurospora discreta
estExt_Genewise1.C_21128
N
0.761
estExt_Genewise1Plus.C_180344
Neurospora tetrasperma
estExt_Genewise1Plus.C_180344
N
0.761
NCU02467
Neurospora crassa
NCU02467
N
0.761
MGG_03086
Magnaporthe oryzae
MGG_03086
N
0.761
e_gw1.1.4685.1
Myceliophthora thermophila
e_gw1.1.4685.1
N
0.746
estExt_Genewise1Plus.C_110324
Daphnia pulex
estExt_Genewise1Plus.C_110324
N
0.732
gw1.4.2036.1
Heterobasidion annosum
gw1.4.2036.1
N
0.732
Pa_1_22200
Podospora anserina
Pa_1_22200
N
0.732
FGSG_09419
Fusarium graminearum
FGSG_09419
N
0.732
CC1G_01457
Coprinopsis cinerea
CC1G_01457
N
0.732
VDBG_02287
Verticillium albo atrum
VDBG_02287
N
0.718
VDAG_02758
Verticillium dahliae
VDAG_02758
N
0.718
CHGG_06716
Chaetomium globosum
CHGG_06716
N
0.718
gw1.4.1321.1
Pleurotus ostreatus
gw1.4.1321.1
N
0.718
FOXG_06071
Fusarium oxysporum
FOXG_06071
N
0.718
DGIL_AUG5s13597g2t1
Acyrtosiphon pisum
DGIL_AUG5s13597g2t1
N
0.704
CAGL0J01914g
Candida glabrata
CAGL0J01914g
N
0.704
fgenesh2_pg.C_sca_10000115
Lottia gigantea
fgenesh2_pg.C_sca_10000115
N
0.704
FVEG_03939
Fusarium verticillioides
FVEG_03939
N
0.704
e_gw1.2.1042.1
Sporobolomyces roseus
e_gw1.2.1042.1
N
0.704
PHUM617480
Pediculus humanus
PHUM617480
N
0.704
GLRG_07641
Colletotrichum graminicola
GLRG_07641
N
0.704
cwf29
Schizosaccharomyces pombe
SPBC887.05c
N
0.704